RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 MBD1Q9UIS9 605 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-202ENST00000290037 COX7A2P2O60397 106 aa13.22□□□□□ -0.29
SEC16A-202ENST00000290037 FBLIM1Q8WUP2 373 aa13.22□□□□□ -0.29
SEC16A-202ENST00000290037 OOEPA6NGQ2 149 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 ZP4Q12836 540 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 ZNF385BQ569K4 471 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 LOXL2Q9Y4K0 774 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 FAM90A26D6RGX4 464 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 MYBPHQ13203 477 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 SLC25A42Q86VD7 318 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 ERGIC1Q969X5 290 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 SEC22AQ96IW7 307 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 IFT22Q9H7X7 185 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 CDC42EP3Q9UKI2 254 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 GAB2Q9UQC2 676 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 C5orf49A4QMS7 147 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 TMEM202A6NGA9 273 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 EPHA2P29317 976 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 ZNF770Q6IQ21 691 aaPredicted RBP13.21□□□□□ -0.29
SEC16A-202ENST00000290037 PARP11Q9NR21 331 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 FBXO4Q9UKT5 387 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 ADAMTSL1Q8N6G6 1762 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 A0A0U1RQK1 487 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 GEMIN2O14893 280 aaKnown RBP13.21□□□□□ -0.29
SEC16A-202ENST00000290037 MT-ND6P03923 174 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 ICAM5Q9UMF0 924 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 DOCK6Q96HP0 2047 aa13.21□□□□□ -0.29
SEC16A-202ENST00000290037 LINC00862A6NCI5 91 aa13.21□□□□□ -0.3
SEC16A-202ENST00000290037 KISS1Q15726 138 aa13.21□□□□□ -0.3
SEC16A-202ENST00000290037 KIRREL2Q6UWL6 708 aa13.21□□□□□ -0.3
SEC16A-202ENST00000290037 NUDCD2Q8WVJ2 157 aa13.21□□□□□ -0.3
SEC16A-202ENST00000290037 ASCC3Q8N3C0 2202 aaKnown RBP13.21□□□□□ -0.3
SEC16A-202ENST00000290037 MGST1P10620 155 aaKnown RBP13.21□□□□□ -0.3
SEC16A-202ENST00000290037 ZNF154Q13106 437 aa13.21□□□□□ -0.3
SEC16A-202ENST00000290037 VAX1Q5SQQ9 334 aa13.21□□□□□ -0.3
SEC16A-202ENST00000290037 OR5T1Q8NG75 326 aa13.21□□□□□ -0.3
SEC16A-202ENST00000290037 FYTTD1Q96QD9 318 aaKnown RBP13.21□□□□□ -0.3
SEC16A-202ENST00000290037 MIOXQ9UGB7 285 aa13.21□□□□□ -0.3
SEC16A-202ENST00000290037 TRDCB7Z8K6 153 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 H7C1C5 153 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 SEC11BP0C7V7 166 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 TMEM217Q8N7C4 229 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 OR4F17Q8NGA8 305 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 ZNF845Q96IR2 970 aaPredicted RBP13.2□□□□□ -0.3
SEC16A-202ENST00000290037 TEX50A0A1B0GTY4 177 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 HLA-GP17693 338 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 CD80P33681 288 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 EDDM3BP56851 147 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 TMEM241Q24JQ0 296 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 MICBQ29980 383 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 GPR137Q96N19 417 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 MYEF2Q9P2K5 600 aaKnown RBP13.2□□□□□ -0.3
SEC16A-202ENST00000290037 SIAH2O43255 324 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 FOXB1Q99853 325 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 PRRT4C9JH25 899 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 CISD3P0C7P0 127 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 GZMHP20718 246 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 RTN4RL1Q86UN2 441 aaPredicted RBP13.2□□□□□ -0.3
SEC16A-202ENST00000290037 WFDC5Q8TCV5 224 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 NAT8Q9UHE5 227 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 PRNDQ9UKY0 176 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 CORTO00230 105 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 MBTPS2O43462 519 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 Q9N2K0 584 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 MPC2O95563 127 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 SEZ6L2Q6UXD5 910 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 ASB1Q9Y576 335 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 PLPP3O14495 311 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 RAE1P78406 368 aaKnown RBP13.2□□□□□ -0.3
SEC16A-202ENST00000290037 OR4A4PQ8NGN8 299 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 GP6Q9HCN6 339 aa13.2□□□□□ -0.3
SEC16A-202ENST00000290037 WSB2Q9NYS7 404 aaPredicted RBP13.2□□□□□ -0.3
SEC16A-202ENST00000290037 FAM24AA6NFZ4 105 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 ASB5Q8WWX0 329 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 HAAOP46952 286 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 SAXO1Q8IYX7 474 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 LOXL4Q96JB6 756 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 ZFP64Q9NPA5 681 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 C9orf170A2RU37 121 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 B4E171 279 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 ITGBL1O95965 494 aaPredicted RBP13.19□□□□□ -0.3
SEC16A-202ENST00000290037 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 ADAT1Q9BUB4 502 aaKnown RBP13.19□□□□□ -0.3
SEC16A-202ENST00000290037 TEX30Q5JUR7 227 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 TMEM108Q6UXF1 575 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 UCNP55089 124 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 ERVS71-1P61550 626 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 KHDC3LQ587J8 217 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 TMEM182Q6ZP80 229 aaPredicted RBP13.19□□□□□ -0.3
SEC16A-202ENST00000290037 SLC24A4Q8NFF2 622 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 MBNL1Q9NR56 388 aaKnown RBP13.19□□□□□ -0.3
SEC16A-202ENST00000290037 TP53BP1Q12888 1972 aaPredicted RBP13.19□□□□□ -0.3
SEC16A-202ENST00000290037 AKR7A2O43488 359 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 SFTA3P0C7M3 94 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 SLC26A10Q8NG04 563 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 OR8G5Q8NG78 346 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 ERGP11308 486 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 HIST1H1BP16401 226 aaKnown RBP13.19□□□□□ -0.3
SEC16A-202ENST00000290037 GNB3P16520 340 aa13.19□□□□□ -0.3
SEC16A-202ENST00000290037 CST9Q5W186 159 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms