RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 C11orf53Q8IXP5 236 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 FAM216BQ8N7L0 139 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 TMEM185AQ8NFB2 350 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 OR5D14Q8NGL3 314 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 OR13C5Q8NGS8 318 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 OR10Z1Q8NGY1 313 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 FBLIM1Q8WUP2 373 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 AQP3Q92482 292 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SGCDQ92629 289 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 EMG1Q92979 244 aaKnown RBP5.46□□□□□ -1.54
CD44-204ENST00000279452 TMEM106AQ96A25 262 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SPSB1Q96BD6 273 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 C10orf35Q96D05 121 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SMIM19Q96E16 107 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 OPALINQ96PE5 141 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SPACA5Q96QH8 159 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 GPER1Q99527 375 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 ZNF649Q9BS31 505 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 MRI1Q9BV20 369 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 TLNRD1Q9H1K6 362 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 RASSF4Q9H2L5 321 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 ZCCHC4Q9H5U6 513 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 C7orf69Q9H7B7 122 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 ELL3Q9HB65 397 aaPredicted RBP5.46□□□□□ -1.54
CD44-204ENST00000279452 TAS2R4Q9NYW5 299 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 NLKQ9UBE8 527 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 CKLFQ9UBR5 152 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 OR14J1Q9UGF5 321 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 ZNF281Q9Y2X9 895 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 ARFGEF3Q5TH69 2177 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 PLCE1Q9P212 2302 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 LOC105371242A0A075B767 164 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 A0A1B0GW55 424 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 A0A1W2PPK0 400 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 OR2AT4A6NND4 320 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 F5H0A9 414 aaPredicted RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 TRAPPC2LH3BP13 241 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 DVL1O14640 695 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 SPRY1O43609 319 aaPredicted RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 NDUFA2O43678 99 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 LALBAP00709 142 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 LHBP01229 141 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 MT-ND2P03891 347 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 WNT2P09544 360 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 DUX4L2P0CJ85 424 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 DUX4L3P0CJ86 424 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 DUX4L4P0CJ87 422 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 DUX4L5P0CJ88 424 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 DUX4L6P0CJ89 424 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 DUX4L7P0CJ90 424 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 TMEM225BP0DP42 221 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 CALCBP10092 127 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 NDUFB7P17568 137 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 ADRA2CP18825 462 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 ZFP36P26651 326 aaKnown RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 CEBPDP49716 269 aaPredicted RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 SLC35A2P78381 396 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 IL13RA1P78552 427 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 SPHARQ15513 63 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 LRRC10Q5BKY1 277 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 ARMCX4Q5H9R4 360 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 RBM48Q5RL73 367 aaKnown RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 TEX36Q5VZQ5 186 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 WDR25Q64LD2 544 aaPredicted RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 DUX4L9Q6RFH8 374 aaPredicted RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 Q6ZSR3 168 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 UTS2BQ765I0 119 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 EGFL6Q8IUX8 553 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 MKXQ8IYA7 352 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 NANOGP1Q8N7R0 232 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 POC1AQ8NBT0 407 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 RGP1Q92546 391 aaPredicted RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 GHSRQ92847 366 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 UFD1Q92890 307 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 C12orf43Q96C57 262 aaKnown RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 ORAI1Q96D31 301 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 CPNE2Q96FN4 548 aaPredicted RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 C1orf159Q96HA4 380 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 CEP19Q96LK0 163 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 OR14A2Q96R54 314 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 NUDT16L1Q9BRJ7 211 aaKnown RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 TMED9Q9BVK6 235 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 PKIBQ9C010 78 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 SMURF1Q9HCE7 757 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 FKBP14Q9NWM8 211 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 PAK1IP1Q9NWT1 392 aaPredicted RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 CTSZQ9UBR2 303 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 DUX4Q9UBX2 424 aa5.45□□□□□ -1.54
CD44-204ENST00000279452 SIRT4Q9Y6E7 314 aaPredicted RBP5.45□□□□□ -1.54
CD44-204ENST00000279452 TANC2Q9HCD6 1990 aa5.44□□□□□ -1.54
CD44-204ENST00000279452 IGKV1-27A0A075B6S5 117 aa5.44□□□□□ -1.54
CD44-204ENST00000279452 IGHV3OR16-10A0A075B7F0 116 aa5.44□□□□□ -1.54
CD44-204ENST00000279452 IGHV2-70DA0A0C4DH43 119 aa5.44□□□□□ -1.54
CD44-204ENST00000279452 IGKV1-9A0A0C4DH69 117 aa5.44□□□□□ -1.54
CD44-204ENST00000279452 A0A1W2PQ09 198 aa5.44□□□□□ -1.54
CD44-204ENST00000279452 RFPL4AA6NLU0 287 aa5.44□□□□□ -1.54
CD44-204ENST00000279452 KIAA1324LA8MWY0 1029 aaPredicted RBP5.44□□□□□ -1.54
CD44-204ENST00000279452 A8MXK9 166 aa5.44□□□□□ -1.54
CD44-204ENST00000279452 RFPL4AL1F8VTS6 287 aa5.44□□□□□ -1.54
CD44-204ENST00000279452 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms