RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZSCAN4Q8NAM6 433 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-201ENST00000277198 OR51T1Q8NGJ9 327 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 INTS12Q96CB8 462 aaKnown RBP11.31□□□□□ -0.6
C9orf3-201ENST00000277198 SAT2Q96F10 170 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-201ENST00000277198 PGAM5Q96HS1 289 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 SPACA5Q96QH8 159 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 MESP1Q9BRJ9 268 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 BANF2Q9H503 90 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 RYDENQ9NUL5 291 aaKnown RBP11.31□□□□□ -0.6
C9orf3-201ENST00000277198 FER1L5A0AVI2 2057 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 DHRS7CA6NNS2 312 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 ZNF814B7Z6K7 855 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 NKX2-8O15522 239 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 MTRF1O75570 445 aaKnown RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 SLC2A1P11166 492 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 CPT2P23786 658 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 OTX1P32242 354 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 SNU13P55769 128 aaKnown RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 HIST1H3AP68431 136 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 IL15RAQ13261 267 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 LY6DQ14210 128 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 IL11RAQ14626 422 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 HIST2H3PS2Q5TEC6 136 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 CARD17Q5XLA6 110 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 LCN10Q6JVE6 187 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 HIST2H3AQ71DI3 136 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 EXTL1Q92935 676 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 TMEM54Q969K7 222 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 NARS2Q96I59 477 aaKnown RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 SOX7Q9BT81 388 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 CHST5Q9GZS9 411 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 WDR54Q9H977 334 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 MMP26Q9NRE1 261 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 NXT1Q9UKK6 140 aaKnown RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 CARHSP1Q9Y2V2 147 aaKnown RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 CHCHD2Q9Y6H1 151 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 H0YIZ8 118 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 CSNK1A1P48729 337 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 ZNF84P51523 738 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 FLI1Q01543 452 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 NKAPLQ5M9Q1 402 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 MRPL14Q6P1L8 145 aaKnown RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 RNF144BQ7Z419 303 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 OR13G1Q8NGZ3 307 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 HAS2Q92819 552 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 S100A13Q99584 98 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 TSNAXQ99598 290 aaKnown RBP11.3□□□□□ -0.6
C9orf3-201ENST00000277198 ZNF160Q9HCG1 818 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 ASF1BQ9NVP2 202 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 EDARQ9UNE0 448 aa11.3□□□□□ -0.6
C9orf3-201ENST00000277198 LOC102723996A0A087X1L8 192 aa11.29□□□□□ -0.6
C9orf3-201ENST00000277198 TERTO14746 1132 aaKnown RBP11.29□□□□□ -0.6
C9orf3-201ENST00000277198 C1QL1O75973 258 aa11.29□□□□□ -0.6
C9orf3-201ENST00000277198 CSTBP04080 98 aaKnown RBP11.29□□□□□ -0.6
C9orf3-201ENST00000277198 FAM157CP0CG43 387 aa11.29□□□□□ -0.6
C9orf3-201ENST00000277198 RPS2P15880 293 aaKnown RBP11.29□□□□□ -0.6
C9orf3-201ENST00000277198 CLDN17P56750 224 aa11.29□□□□□ -0.6
C9orf3-201ENST00000277198 CSNK2A1P68400 391 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-201ENST00000277198 C6orf15Q6UXA7 325 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-201ENST00000277198 POC1AQ8NBT0 407 aa11.29□□□□□ -0.6
C9orf3-201ENST00000277198 CSNK2A3Q8NEV1 391 aa11.29□□□□□ -0.6
C9orf3-201ENST00000277198 RRNAD1Q96FB5 475 aaKnown RBP11.29□□□□□ -0.6
C9orf3-201ENST00000277198 CPNE2Q96FN4 548 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-201ENST00000277198 ZPBPQ9BS86 351 aa11.29□□□□□ -0.6
C9orf3-201ENST00000277198 PECRQ9BY49 303 aa11.29□□□□□ -0.6
C9orf3-201ENST00000277198 DECR2Q9NUI1 292 aa11.29□□□□□ -0.6
C9orf3-201ENST00000277198 ZNF629Q9UEG4 869 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-201ENST00000277198 A0A1W2PP11 408 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 NUPL2O15504 423 aaKnown RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 BLVRBP30043 206 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 SFTPDP35247 375 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 SUCLG1P53597 346 aaKnown RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 RPS18P62269 152 aaKnown RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 ANKRD55Q3KP44 614 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 CHRFAM7AQ494W8 412 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 CRIP3Q6Q6R5 217 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 OPN5Q6U736 354 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 RTN4RL2Q86UN3 420 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 CT55Q8WUE5 264 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 LYZL4Q96KX0 146 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 NAA11Q9BSU3 229 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 ST6GALNAC5Q9BVH7 336 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 METTL8Q9H825 291 aaKnown RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 C1orf123Q9NWV4 160 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 EHFQ9NZC4 300 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 LPAR3Q9UBY5 353 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 NDRG3Q9UGV2 375 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 C14orf166Q9Y224 244 aaKnown RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 FASNP49327 2511 aaKnown RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 SPENQ96T58 3664 aaKnown RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 TLN1Q9Y490 2541 aaKnown RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 RAMP1O60894 148 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 ENDOGQ14249 297 aaKnown RBP11.28□□□□□ -0.6
C9orf3-201ENST00000277198 SLC9A3R2Q15599 337 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 ZNF585AQ6P3V2 769 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 SPAG16Q8N0X2 631 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 ESX1Q8N693 406 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 ADAMTS17Q8TE56 1095 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms