RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 RAB32Q13637 225 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 PPA1Q15181 289 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 ANKRD55Q3KP44 614 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 RPL7L1Q6DKI1 246 aaKnown RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 PNLDC1Q8NA58 520 aaKnown RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 ZNF524Q96C55 264 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 YPEL4Q96NS1 127 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 STRAPQ9Y3F4 350 aaKnown RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 HS3ST3B1Q9Y662 390 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 MED13Q9UHV7 2174 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 FREM3P0C091 2139 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 A8MVM7 634 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 H3BSH0 61 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 PPIHO43447 177 aaKnown RBP9.06□□□□□ -0.96
UPF3B-201ENST00000276201 SLC2A1P11166 492 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 GP1BBP13224 206 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 ZNF823P16415 610 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 ZNF708P17019 499 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 CD80P33681 288 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 PPT1P50897 306 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 SSTP61278 116 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 RTL6Q6ICC9 239 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 OR5D14Q8NGL3 314 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 OR1J1Q8NGS3 322 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 KCNG3Q8TAE7 436 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 EDARADDQ8WWZ3 215 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 OR10C1Q96KK4 312 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 C1orf147Q96MC9 270 aaPredicted RBP9.06□□□□□ -0.96
UPF3B-201ENST00000276201 NAA11Q9BSU3 229 aaPredicted RBP9.06□□□□□ -0.96
UPF3B-201ENST00000276201 FAM212BQ9NTI7 297 aaPredicted RBP9.06□□□□□ -0.96
UPF3B-201ENST00000276201 P4HTMQ9NXG6 502 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 PLA2G2EQ9NZK7 142 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 TMEM269A0A1B0GVZ9 245 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 ALG1L2C9J202 215 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 MASP2O00187 686 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 GNB3P16520 340 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 ZNF14P17017 642 aaPredicted RBP9.06□□□□□ -0.96
UPF3B-201ENST00000276201 LAP3P28838 519 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 HAAOP46952 286 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 HTR5AP47898 357 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 P2RY4P51582 365 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 CCR4P51679 360 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 EMP2P54851 167 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 SLC37A1P57057 533 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 CD81P60033 236 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 ARL6IP1Q15041 203 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 SLC22A6Q4U2R8 563 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 C1orf140Q5VVS0 124 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 Q6ZRG5 221 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 FAM89BQ8N5H3 189 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 OR9K2Q8NGE7 335 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 OR52N4Q8NGI2 321 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 OR56B1Q8NGI3 324 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 OR5H2Q8NGV7 314 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 ASB10Q8WXI3 467 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 FGGYQ96C11 551 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 CMBLQ96DG6 245 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 IP6K3Q96PC2 410 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 GINS3Q9BRX5 216 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 OPA3Q9H6K4 179 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 KLHL13Q9P2N7 655 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 GHRLQ9UBU3 117 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 B3GALT5Q9Y2C3 310 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 RPH3AQ9Y2J0 694 aaPredicted RBP9.06□□□□□ -0.96
UPF3B-201ENST00000276201 MMACHCQ9Y4U1 282 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 KALRNO60229 2985 aa9.06□□□□□ -0.96
UPF3B-201ENST00000276201 FOXI3A8MTJ6 420 aaPredicted RBP9.05□□□□□ -0.96
UPF3B-201ENST00000276201 KCNAB3O43448 404 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 CLN5O75503 358 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 DEDDO75618 318 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 IFNA17P01571 189 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 TTRP02766 147 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 PRB1P04280 392 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 DANCRP0C864 163 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 NME2P22392 152 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 ALDH3B1P43353 468 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 FOXK1P85037 733 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 RBM39Q14498 530 aaKnown RBP9.05□□□□□ -0.96
UPF3B-201ENST00000276201 AWAT1Q58HT5 328 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 GATSQ8NAP1 163 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 LFNGQ8NES3 379 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 OR8G5Q8NG78 346 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 ADIPOR1Q96A54 375 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 CPNE2Q96FN4 548 aaPredicted RBP9.05□□□□□ -0.96
UPF3B-201ENST00000276201 VN1R1Q9GZP7 353 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 RGCCQ9H4X1 137 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 RPS10P5Q9NQ39 176 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 DECR2Q9NUI1 292 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 C1orf123Q9NWV4 160 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 TREM2Q9NZC2 230 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 COA3Q9Y2R0 106 aaPredicted RBP9.05□□□□□ -0.96
UPF3B-201ENST00000276201 CFAP46Q8IYW2 2715 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 TMED7-TICAM2A0A0A6YYA0 188 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 A0A0A6YYD4 124 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 FTCDNL1E5RQL4 147 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 C11orf98E9PRG8 122 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 P2RY10O00398 339 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 ADAP1O75689 374 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 C1QL1O75973 258 aa9.05□□□□□ -0.96
UPF3B-201ENST00000276201 IGHEP01854 428 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms