RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 IGHV5-10-1A0A0J9YXX1 117 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 MFNGO00587 321 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 TGOLN2O43493 480 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 NXPH3O95157 252 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 EPPINO95925 133 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 MPGP29372 298 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 TMEM33P57088 247 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 H3F3AP84243 136 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 PSG6Q00889 435 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 CBLN3Q6UW01 205 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 CLEC18BQ6UXF7 455 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 CHST11Q9NPF2 352 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 PRR13Q9NZ81 148 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 LOXL2Q9Y4K0 774 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 CREBBPQ92793 2442 aa10.25□□□□□ -0.77
CLSTN3-201ENST00000266546 SP9P0CG40 484 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 FABP4P15090 132 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 MUC1P15941 1255 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 FKBP2P26885 142 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 HNF4GQ14541 408 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 OR2A2Q6IF42 318 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 UNQ9370/PRO34162Q6UXP9 181 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 LINC00696Q6ZRV3 163 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 PRR18Q8N4B5 295 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 SGK3Q96BR1 496 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 TVP23CQ96ET8 276 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 IP6K3Q96PC2 410 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 TAAR9Q96RI9 348 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 MFRPQ9BY79 579 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 ICAM5Q9UMF0 924 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 VSIG4Q9Y279 399 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 AMDHD2Q9Y303 409 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 TMEM184BQ9Y519 407 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 SLCO1B1Q9Y6L6 691 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 ARHGEF17Q96PE2 2063 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 DNASE2O00115 360 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 CTLA4P16410 223 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 CALCRP30988 508 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 RAB4BP61018 213 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 B2MP61769 119 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 HBG1P69891 147 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 HBG2P69892 147 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 RBPJQ06330 500 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 TESK1Q15569 626 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 SP6Q3SY56 376 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 ZNF705AQ6ZN79 300 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 CTHRC1Q96CG8 243 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 ARHGAP5-AS1Q96IT6 56 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 SAMD10Q9BYL1 202 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 ABCA7Q8IZY2 2146 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 MUC22E2RYF6 1773 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 CCDC187A0A096LP49 1063 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 H7BYZ3 331 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 GSK3AP49840 483 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 SUMO3P55854 103 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 MESTQ5EB52 335 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 TMEM74BQ9NUR3 256 aa10.24□□□□□ -0.77
CLSTN3-201ENST00000266546 MED19A0JLT2 244 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 SERPINE3A8MV23 424 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 HRKO00198 91 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 KLK10O43240 276 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 RNF4P78317 190 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 TMEM268Q5VZI3 342 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 ADAD2Q8NCV1 583 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 GJC3Q8NFK1 279 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 ASB5Q8WWX0 329 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 KLHDC2Q9Y2U9 406 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 GJE1A6NN92 205 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 ZNF727A8MUV8 499 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 KLF4O43474 513 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 SULT1A1P50225 295 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 GAS1P54826 345 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 TMEM41BQ5BJD5 291 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 FIP1L1Q6UN15 594 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 LCN15Q6UWW0 184 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 PLXDC2Q6UX71 529 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 SEMA6DQ8NFY4 1073 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 PRO1933Q9H354 126 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 HEATR5BQ9P2D3 2071 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 B4E171 279 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 EIF3GO75821 320 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 TSPAN7P41732 249 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 ACAA2P42765 397 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 SSR4P51571 173 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 FOXK1P85037 733 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 FMODQ06828 376 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 ZNF429Q86V71 674 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 MKXQ8IYA7 352 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 EIF4E3Q8N5X7 224 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 WSB1Q9Y6I7 421 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 DENND4AQ7Z401 1863 aa10.23□□□□□ -0.77
CLSTN3-201ENST00000266546 LY86O95711 162 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 SERPINA7P05543 415 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 APOBEC1P41238 236 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 FHL5Q5TD97 284 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 DEGS2Q6QHC5 323 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 ANKRD37Q7Z713 158 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 RPS4Y2Q8TD47 263 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 GPR119Q8TDV5 335 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 C11orf40Q8WZ69 217 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms