RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MMP16P51512 607 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 CLDN6P56747 220 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 OR2B8PP59922 312 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 PCOLCEQ15113 449 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 MIDNQ504T8 468 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 NCMAPQ5T1S8 102 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 C1orf210Q8IVY1 113 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 LFNGQ8NES3 379 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 SLC26A10Q8NG04 563 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 OR2M3Q8NG83 312 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 OR52N4Q8NGI2 321 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 OR5H2Q8NGV7 314 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 FGGYQ96C11 551 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 LPAR5Q9H1C0 372 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 BCO1Q9HAY6 547 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 KCNJ16Q9NPI9 418 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 C1orf123Q9NWV4 160 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 GAR1Q9NY12 217 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 KLHL13Q9P2N7 655 aa9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 COA3Q9Y2R0 106 aaPredicted RBP9.5□□□□□ -0.89
CHRNA1-201ENST00000261007 LMX1BO60663 402 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 IFNA10P01566 189 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 HIST1H1DP16402 221 aaKnown RBP9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 ECI1P42126 302 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 POU3F1Q03052 451 aaPredicted RBP9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 SPEM2Q0P670 501 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 KIAA0141Q14154 515 aaPredicted RBP9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 TGIF1Q15583 401 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 PYY3Q5JQD4 70 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 C9orf152Q5JTZ5 239 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 THEM4Q5T1C6 240 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 UEVLDQ8IX04 471 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 FADS6Q8N9I5 356 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 OR10H5Q8NGA6 315 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 OR10G3Q8NGC4 313 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 OR5D14Q8NGL3 314 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 CPNE4Q96A23 557 aaPredicted RBP9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 PRRX2Q99811 253 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 GINS3Q9BRX5 216 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 EIF5A2Q9GZV4 153 aaKnown RBP9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 GSKIPQ9P0R6 139 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 AMDHD2Q9Y303 409 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 SZT2Q5T011 3432 aa9.49□□□□□ -0.89
CHRNA1-201ENST00000261007 IGHV1-45A0A0A0MS14 117 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 BORCS7-ASMTA0A0B4J1R7 106 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 LOC102725191A0A1B0GVB3 256 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 B4E171 279 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 SEC14L6B5MCN3 397 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 P2RY10O00398 339 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 OR2C1O95371 312 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 ZNF883P0CG24 379 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 DAOP14920 347 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 TSPAN7P41732 249 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 ZNF84P51523 738 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 TMEM33P57088 247 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 FOXL2P58012 376 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 TAS2R46P59540 309 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 CLINT1Q14677 625 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 TRIM61Q5EBN2 209 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 AADACL3Q5VUY0 350 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 OR2A2Q6IF42 318 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 RPUSD3Q6P087 351 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 STX12Q86Y82 276 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 LILRB2Q8N423 598 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 LRRC18Q8N456 261 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 ZNF383Q8NA42 475 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 OR13G1Q8NGZ3 307 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 KCNG3Q8TAE7 436 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 ST7LQ8TDW4 575 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 MR1Q95460 341 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 FOXN4Q96NZ1 517 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 GNRHR2Q96P88 292 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 FSCN3Q9NQT6 498 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 GFOD1Q9NXC2 390 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 XIRP2A4UGR9 3374 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 A0A1W2PPE2 198 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 C2orf72A6NCS6 295 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 WISP1O95388 367 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 F10P00742 488 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 IGHG1P01857 330 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 ARG1P05089 322 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 SFTPBP07988 381 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 HLA-DOBP13765 273 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 HIST1H1BP16401 226 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 CHATP28329 748 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 RBP2P50120 134 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 MYBPHQ13203 477 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 OTPQ5XKR4 325 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 LCN10Q6JVE6 187 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 DEFB123Q8N688 67 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 OR2I1PQ8NGU4 316 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 OR2Y1Q8NGV0 311 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 POC1BQ8TC44 478 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 SLAMF9Q96A28 289 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 DNAJA3Q96EY1 480 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 IMMP1LQ96LU5 166 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 UNKLQ9H9P5 680 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 C19orf12Q9NSK7 152 aa9.48□□□□□ -0.89
CHRNA1-201ENST00000261007 PTRH2Q9Y3E5 179 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms