RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 A0A1W2PPH5 198 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 TCRBV3S1A0A5B6 114 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 CCDC182A6NF36 153 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 DHRS3O75911 302 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 NRASP01111 189 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 FAHP16930 419 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 PTGES3Q15185 160 aaKnown RBP17.2■□□□□ 0.34
NEDD8-201ENST00000250495 SMIM21Q3B7S5 101 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 DMRTC1Q5HYR2 192 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 ACP7Q6ZNF0 438 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 FAM185AQ8N0U4 392 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 PPP1R14AQ96A00 147 aa17.2■□□□□ 0.34
NEDD8-201ENST00000250495 ELL3Q9HB65 397 aaPredicted RBP17.2■□□□□ 0.34
NEDD8-201ENST00000250495 SLC22A31A6NKX4 558 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 RFPL4AA6NLU0 287 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 RFPL4AL1F8VTS6 287 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 VHLP40337 213 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 ESRRGP62508 458 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 SLC35E4Q6ICL7 350 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 MEPCEQ7L2J0 689 aaKnown RBP17.19■□□□□ 0.34
NEDD8-201ENST00000250495 ZNF573Q86YE8 665 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 POC1AQ8NBT0 407 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 CNN2Q99439 309 aaKnown RBP17.19■□□□□ 0.34
NEDD8-201ENST00000250495 MNTQ99583 582 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 SSX3Q99909 188 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 PPA2Q9H2U2 334 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 S100A14Q9HCY8 104 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 FBLN5Q9UBX5 448 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 COPS3Q9UNS2 423 aa17.19■□□□□ 0.34
NEDD8-201ENST00000250495 PRR32B1ATL7 298 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 SLC1A7O00341 560 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 ANGPTL7O43827 346 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 PRKYO43930 277 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 PRDX2P32119 198 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 HAAOP46952 286 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 DAPP51397 102 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 CLVS2Q5SYC1 327 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 HCP5Q6MZN7 132 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 ZFP1Q6P2D0 407 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 FAHD1Q6P587 224 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 ZNF322Q6U7Q0 402 aaPredicted RBP17.18■□□□□ 0.34
NEDD8-201ENST00000250495 ZNF561Q8N587 486 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 OR51G2Q8NGK0 314 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 OR5K1Q8NHB7 308 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 TTTY10Q9BZA0 68 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 MEGF9Q9H1U4 602 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 HEXA-AS1Q9H8Q6 139 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 MOB1AQ9H8S9 216 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 GTF2A1LQ9UNN4 478 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 POLDIP2Q9Y2S7 368 aa17.18■□□□□ 0.34
NEDD8-201ENST00000250495 hCG_1809904A0A1W2PP81 198 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 A0A1W2PPE2 198 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 A0A1W2PR64 198 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 A0A1W2PRV1 198 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 LOC110117498-PIK3R3F6TDL0 507 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 H3BUX3 64 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 DLGAP1O14490 977 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 NOS1APO75052 506 aaPredicted RBP17.17■□□□□ 0.34
NEDD8-201ENST00000250495 TTRP02766 147 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 PGA5P0DJD9 388 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 CXCR4P61073 352 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 RPL31P62899 125 aaKnown RBP17.17■□□□□ 0.34
NEDD8-201ENST00000250495 EGR3Q06889 387 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 CD177Q8N6Q3 437 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 C19orf12Q9NSK7 152 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 R4GMQ9 66 aa17.17■□□□□ 0.34
NEDD8-201ENST00000250495 VWFP04275 2813 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 J3QT63 122 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 GABRA5P31644 462 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 MFGE8Q08431 387 aaPredicted RBP17.16■□□□□ 0.34
NEDD8-201ENST00000250495 AANATQ16613 207 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 C2orf68Q2NKX9 166 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 BCL2L15Q5TBC7 163 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 NXNL2Q5VZ03 156 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 TMEM42Q69YG0 159 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 SLC35F2Q8IXU6 374 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 MKXQ8IYA7 352 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 ELMOD2Q8IZ81 293 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 ZNF488Q96MN9 340 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 APOL4Q9BPW4 351 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 RAB18Q9NP72 206 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 OR52A1Q9UKL2 312 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.16■□□□□ 0.34
NEDD8-201ENST00000250495 SNX5Q9Y5X3 404 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 V9GYS6 101 aa17.16■□□□□ 0.34
NEDD8-201ENST00000250495 NOTCH1P46531 2555 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 ZNF670-ZNF695F2Z2N8 137 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 SYNGR1O43759 233 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 SRSF10O75494 262 aaKnown RBP17.15■□□□□ 0.34
NEDD8-201ENST00000250495 NXPH2O95156 264 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 LRRC75BQ2VPJ9 315 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 TMEM200BQ69YZ2 307 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 C11orf88Q6PI97 169 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 TCEANCQ8N8B7 351 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 DTX3Q8N9I9 347 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 OR2T27Q8NH04 317 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 C17orf50Q8WW18 174 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 GPR173Q9NS66 373 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 KRT84Q9NSB2 600 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 CLN6Q9NWW5 311 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms