RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ITPKCQ96DU7 683 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 ZNF799Q96GE5 643 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 MOB1AQ9H8S9 216 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 TUBG2Q9NRH3 451 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 SIGLEC9Q9Y336 463 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 FAM96BQ9Y3D0 163 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 F5H5K5 113 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 GYPAP02724 150 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 OTX1P32242 354 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-201ENST00000242776 PSMB10P40306 273 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 CX3CR1P49238 355 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 DLX1P56177 255 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 TAS2R43P59537 309 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 PSMA6P60900 246 aaKnown RBP11.37□□□□□ -0.59
DDX39A-201ENST00000242776 RPL15P61313 204 aaKnown RBP11.37□□□□□ -0.59
DDX39A-201ENST00000242776 IRF3Q14653 427 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 ZNF181Q2M3W8 571 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 ZNF684Q5T5D7 378 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 SAMD5Q5TGI4 173 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 CD276Q5ZPR3 534 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 DRAM2Q6UX65 266 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 FBXW12Q6X9E4 464 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 FGFRL1Q8N441 504 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 NANOGP1Q8N7R0 232 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 OR5L1Q8NGL2 311 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 SPRYD4Q8WW59 207 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-201ENST00000242776 FCGR1BQ92637 280 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 ZNF649Q9BS31 505 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 SIRPDQ9H106 197 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 DPAGT1Q9H3H5 408 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 TRIM36Q9NQ86 728 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 CLEC2DQ9UHP7 191 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 R4GMQ9 66 aa11.37□□□□□ -0.59
DDX39A-201ENST00000242776 KMT2CQ8NEZ4 4911 aaKnown RBP11.37□□□□□ -0.59
DDX39A-201ENST00000242776 C5orf63A6NC05 138 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 ACOD1A6NK06 481 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 IQCF6A8MYZ5 107 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 PRR32B1ATL7 298 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 LOC110117498-PIK3R3F6TDL0 507 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 J3QW42 95 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 RPP14O95059 124 aaKnown RBP11.36□□□□□ -0.59
DDX39A-201ENST00000242776 ANXA2P07355 339 aaKnown RBP11.36□□□□□ -0.59
DDX39A-201ENST00000242776 HTR1AP08908 422 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 ACSM4P0C7M7 580 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 PRKXP51817 358 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 OR12D2P58182 307 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 MED22Q15528 200 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 KRTAP27-1Q3LI81 207 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 OR2G6Q5TZ20 316 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 ZNF367Q7RTV3 350 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 VMO1Q7Z5L0 202 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 LDLRAD3Q86YD5 345 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 SPARTQ8N0X7 666 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 PNLDC1Q8NA58 520 aaKnown RBP11.36□□□□□ -0.59
DDX39A-201ENST00000242776 APOBEC3DQ96AK3 386 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-201ENST00000242776 PPA2Q9H2U2 334 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 C16orf95Q9H693 158 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 ONECUT1Q9UBC0 465 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 FOXJ3Q9UPW0 622 aa11.36□□□□□ -0.59
DDX39A-201ENST00000242776 IGHV3OR15-7A0A075B7D8 119 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 TMEM269A0A1B0GVZ9 245 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 BTBD17A6NE02 478 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 ANKRD61A6NGH8 418 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 MAGEB4O15481 346 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-201ENST00000242776 NPY4RP50391 375 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 CCDC58Q4VC31 144 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 OXLD1Q5BKU9 147 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 Q6ZTK2 550 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 BTN2A1Q7KYR7 527 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 ST8SIA4Q92187 359 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 PELI1Q96FA3 418 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 MRPS26Q9BYN8 205 aaKnown RBP11.35□□□□□ -0.59
DDX39A-201ENST00000242776 ISG20L2Q9H9L3 353 aaKnown RBP11.35□□□□□ -0.59
DDX39A-201ENST00000242776 ACOT13Q9NPJ3 140 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 GTF2A1LQ9UNN4 478 aa11.35□□□□□ -0.59
DDX39A-201ENST00000242776 FCN3O75636 299 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 OPN1MWP04001 364 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 LCATP04180 440 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 LIPFP07098 398 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 RPSAP08865 295 aaKnown RBP11.34□□□□□ -0.59
DDX39A-201ENST00000242776 OPN1MW2P0DN77 364 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 OPN1MW3P0DN78 364 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 VSIG8P0DPA2 414 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 MAP2K4P45985 399 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 TGM4P49221 684 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 ZNF121P58317 390 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-201ENST00000242776 BDH1Q02338 343 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 EMX1Q04741 257 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-201ENST00000242776 SPHARQ15513 63 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 OR8G1Q15617 311 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 BCL2L15Q5TBC7 163 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 SLC35E4Q6ICL7 350 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 C1orf122Q6ZSJ8 110 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 PNKDQ8N490 385 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 OR52H1Q8NGJ2 320 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 PGAM5Q96HS1 289 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 ISYNA1Q9NPH2 558 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 BRD7Q9NPI1 651 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 SIRT7Q9NRC8 400 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms