RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SORDQ00796 357 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 OC90Q02509 493 aaPredicted RBP6.85□□□□□ -1.31
CXCR4-201ENST00000241393 FOXI1Q12951 378 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 FHL3Q13643 280 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 SCGB2B2Q4G0G5 96 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 NSUN5P2Q63ZY6 315 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF660Q6AZW8 331 aaPredicted RBP6.85□□□□□ -1.31
CXCR4-201ENST00000241393 MRGPRGQ86SM5 289 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF546Q86UE3 836 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 NAA40Q86UY6 237 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 ANGPTL5Q86XS5 388 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 PDZD9Q8IXQ8 264 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 CHST4Q8NCG5 386 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 OR8B12Q8NGG6 310 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 OR13C9Q8NGT0 318 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 M1APQ8TC57 530 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 OR51E1Q8TCB6 317 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 SSC4DQ8WTU2 575 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 PHYHIPLQ96FC7 376 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 SCGB3A2Q96PL1 93 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 PHB2Q99623 299 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 URM1Q9BTM9 101 aaKnown RBP6.85□□□□□ -1.31
CXCR4-201ENST00000241393 ANGPTL4Q9BY76 406 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 DNTTIP1Q9H147 329 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 LPAR5Q9H1C0 372 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 NARFLQ9H6Q4 476 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF224Q9NZL3 707 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 SHPKQ9UHJ6 478 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 FBXL2Q9UKC9 423 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 VSIG4Q9Y279 399 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 FARSAQ9Y285 508 aaKnown RBP6.85□□□□□ -1.31
CXCR4-201ENST00000241393 MRPS28Q9Y2Q9 187 aaKnown RBP6.85□□□□□ -1.31
CXCR4-201ENST00000241393 NOP16Q9Y3C1 178 aaKnown RBP6.85□□□□□ -1.31
CXCR4-201ENST00000241393 RALGAPA1Q6GYQ0 2036 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 ASCC3Q8N3C0 2202 aaKnown RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 SZT2Q5T011 3432 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 A0A0U1RQV5 110 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 C9orf170A2RU37 121 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 MBD3L5A6NJ08 208 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 A8MXK9 166 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 SULT2B1O00204 365 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 JTBO76095 146 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 DUS4LO95620 317 aaKnown RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 IFNA6P05013 189 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 FCER2P06734 321 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 QDPRP09417 244 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF250P15622 560 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 HIST1H1DP16402 221 aaKnown RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF17P17021 662 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 GUCA1AP43080 201 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 CX3CR1P49238 355 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 ECH1Q13011 328 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 PPA1Q15181 289 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 TMEM176BQ3YBM2 270 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 PMS2CLQ68D20 193 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 RTL6Q6ICC9 239 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 C11orf87Q6NUJ2 197 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 ABHD12BQ7Z5M8 362 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 HOGA1Q86XE5 327 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 UBALD2Q8IYN6 164 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 FAM89BQ8N5H3 189 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 GJC3Q8NFK1 279 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 OR56B1Q8NGI3 324 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 TMEM54Q969K7 222 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 IMMP1LQ96LU5 166 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 C1orf147Q96MC9 270 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 NKX3-1Q99801 234 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 GAL3ST1Q99999 423 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 NAA11Q9BSU3 229 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-201ENST00000241393 SELENOIQ9C0D9 397 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 CST11Q9H112 138 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 GPR84Q9NQS5 396 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 GLS2Q9UI32 602 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 PILRBQ9UKJ0 227 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 TNFSF18Q9UNG2 199 aa6.84□□□□□ -1.31
CXCR4-201ENST00000241393 IGHV1-45A0A0A0MS14 117 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 KANTRA0A1W2PQU2 76 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 FAM90A18PA6NE21 464 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 FAM90A16PA6NEW6 464 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 FAM90A9PA6NNJ1 464 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 DHRS7CA6NNS2 312 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 FAM90A5PA8MXJ8 464 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF814B7Z6K7 855 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 BET1O15155 118 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 NKX2-8O15522 239 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 BCL2L11O43521 198 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 SSX5O60225 188 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 TK1P04183 234 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 KLK3P07288 261 aaPredicted RBP6.84□□□□□ -1.32
CXCR4-201ENST00000241393 FGF2P09038 288 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 FAM90A15PP0C7V4 464 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 FAM90A14PP0C7W9 464 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 MSR1P21757 451 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 HRH1P35367 487 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 CSNK1A1P48729 337 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 DHPSP49366 369 aaPredicted RBP6.84□□□□□ -1.32
CXCR4-201ENST00000241393 DUSP3P51452 185 aaPredicted RBP6.84□□□□□ -1.32
CXCR4-201ENST00000241393 PRKXP51817 358 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 SUCLG1P53597 346 aaKnown RBP6.84□□□□□ -1.32
CXCR4-201ENST00000241393 DSCR4P56555 118 aaPredicted RBP6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms