RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SNTB2Q13425 540 aaKnown RBP13.15□□□□□ -0.3
CLN6-219ENST00000637329 OR2T2Q6IF00 324 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 RGS7BPQ6MZT1 257 aaPredicted RBP13.15□□□□□ -0.3
CLN6-219ENST00000637329 ASCL4Q6XD76 172 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 SAXO1Q8IYX7 474 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 MINDY2Q8NBR6 621 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 NUP37Q8NFH4 326 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 SMIM4Q8WVI0 70 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 OR5P3Q8WZ94 311 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 FAM46BQ96A09 425 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 RTL8AQ9BWD3 113 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 TMEM59Q9BXS4 323 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 PCDHB16Q9NRJ7 776 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 ERRFI1Q9UJM3 462 aaPredicted RBP13.15□□□□□ -0.3
CLN6-219ENST00000637329 PURGQ9UJV8 347 aaKnown RBP13.15□□□□□ -0.3
CLN6-219ENST00000637329 POLEQ07864 2286 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 IGKV1-27A0A075B6S5 117 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 A0A1B0GWJ7 208 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A27PA6NNH2 459 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 VGLL3A8MV65 326 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 CDC14BO60729 498 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 THBDP07204 575 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 ZNF250P15622 560 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 AGAP20933 346 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 MPV17P39210 176 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 PTH2RP49190 550 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 GNG3P63215 75 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 PSG7Q13046 419 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 PLA2G7Q13093 441 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 BAK1Q16611 211 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 RNF144BQ7Z419 303 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 BHLHE23Q8NDY6 225 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 OR8G5Q8NG78 346 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 CA5BP1Q8WTZ4 195 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 TRIM63Q969Q1 353 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 RFT1Q96AA3 541 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 ABHD1Q96SE0 405 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 MICU1Q9BPX6 476 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 URM1Q9BTM9 101 aaKnown RBP13.14□□□□□ -0.31
CLN6-219ENST00000637329 ADAT1Q9BUB4 502 aaKnown RBP13.14□□□□□ -0.31
CLN6-219ENST00000637329 METTL9Q9H1A3 318 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 ATG5Q9H1Y0 275 aa13.14□□□□□ -0.31
CLN6-219ENST00000637329 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
CLN6-219ENST00000637329 A0A1W2PQ09 198 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 GABARAPH6UMI1 98 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 KDM4BO94953 1096 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 PTTG1O95997 202 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 CHRM2P08172 466 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 RPS27AP62979 156 aaKnown RBP13.13□□□□□ -0.31
CLN6-219ENST00000637329 PDZK1IP1Q13113 114 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 TMEM200AQ86VY9 491 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 ZNF573Q86YE8 665 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 WFDC8Q8IUA0 241 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 SNX29P2Q8IUI4 249 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 ZNF808Q8N4W9 903 aaPredicted RBP13.13□□□□□ -0.31
CLN6-219ENST00000637329 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 MRPS24Q96EL2 167 aaKnown RBP13.13□□□□□ -0.31
CLN6-219ENST00000637329 POM121Q96HA1 1249 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 KCNJ16Q9NPI9 418 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 C14orf119Q9NWQ9 140 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 CRIM1Q9NZV1 1036 aa13.13□□□□□ -0.31
CLN6-219ENST00000637329 TMEM210A6NLX4 147 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 ATP6V1G2-DDX39BF2Z307 99 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 TIMM8AO60220 97 aaPredicted RBP13.12□□□□□ -0.31
CLN6-219ENST00000637329 CRTAPO75718 401 aaPredicted RBP13.12□□□□□ -0.31
CLN6-219ENST00000637329 TMEM225BP0DP42 221 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 MGMTP16455 207 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 CA6P23280 308 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 CPT2P23786 658 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 GPM6AP51674 278 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 ASAH1Q13510 395 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 RSU1Q15404 277 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 SLC22A6Q4U2R8 563 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 DNM1P46Q6ZS02 220 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 C22orf34Q6ZV56 151 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 BIVMQ86UB2 503 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 ZNF611Q8N823 705 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 OR56B1Q8NGI3 324 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 CHPT1Q8WUD6 406 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 TM2D1Q9BX74 207 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 PKIBQ9C010 78 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 FGF23Q9GZV9 251 aaPredicted RBP13.12□□□□□ -0.31
CLN6-219ENST00000637329 LPAR5Q9H1C0 372 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 ESRP2Q9H6T0 727 aaKnown RBP13.12□□□□□ -0.31
CLN6-219ENST00000637329 ZNF442Q9H7R0 627 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 RHOFQ9HBH0 211 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 NDRG3Q9UGV2 375 aa13.12□□□□□ -0.31
CLN6-219ENST00000637329 UTP20O75691 2785 aaKnown RBP13.12□□□□□ -0.31
CLN6-219ENST00000637329 USP9YO00507 2555 aaPredicted RBP13.12□□□□□ -0.31
CLN6-219ENST00000637329 ANKRD17O75179 2603 aaKnown RBP13.11□□□□□ -0.31
CLN6-219ENST00000637329 IGLV3-9A0A075B6K5 115 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 LRP5LA4QPB2 252 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 CLEC18AA5D8T8 446 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 ZNF732B4DXR9 585 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 SULT1C2O00338 296 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 LILRA1O75019 489 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 MPIG6BO95866 241 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 CYB5AP00167 134 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms