RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 GOSR1O95249 250 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 EIF4EP06730 217 aaKnown RBP12.38□□□□□ -0.43
LINC00339-208ENST00000634934 OR4A8P0C604 315 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 BTCP35070 178 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 GSK3AP49840 483 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 MRPS10P82664 201 aaKnown RBP12.38□□□□□ -0.43
LINC00339-208ENST00000634934 MSMPQ1L6U9 139 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 ACSM3Q53FZ2 586 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 FBXW12Q6X9E4 464 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 DOK3Q7L591 496 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 CEACAM19Q7Z692 300 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 OR10AC1Q8NH08 325 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 LILRB1Q8NHL6 650 aaPredicted RBP12.38□□□□□ -0.43
LINC00339-208ENST00000634934 ANGPTL6Q8NI99 470 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 SYNPRQ8TBG9 265 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 TRMT10AQ8TBZ6 339 aaKnown RBP12.38□□□□□ -0.43
LINC00339-208ENST00000634934 C15orf40Q8WUR7 153 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 SPSB4Q96A44 273 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 DMRTB1Q96MA1 342 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 SYT3Q9BQG1 590 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 REPIN1Q9BWE0 567 aaKnown RBP12.38□□□□□ -0.43
LINC00339-208ENST00000634934 RANBP3Q9H6Z4 567 aaPredicted RBP12.38□□□□□ -0.43
LINC00339-208ENST00000634934 ZNF442Q9H7R0 627 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 HHLA2Q9UM44 414 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 APCP25054 2843 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 ROS1P08922 2347 aa12.38□□□□□ -0.43
LINC00339-208ENST00000634934 NAP1L6A6NFF2 107 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 CTAG2O75638 210 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 ISG15P05161 165 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 RAC2P15153 192 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 ACHEP22303 614 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 CFPP27918 469 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 SELENOVP59797 346 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 FAM3AP98173 230 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 CD83Q01151 205 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 PSG7Q13046 419 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 ADIPOQQ15848 244 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 MBNL2Q5VZF2 373 aaKnown RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 ZNF57Q68EA5 555 aaPredicted RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 OR2T2Q6IF00 324 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 LRP11Q86VZ4 500 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 SAMD12Q8N8I0 201 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 BHLHE23Q8NDY6 225 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 OR13C5Q8NGS8 318 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 TSEN15Q8WW01 171 aaKnown RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 HAVCR1Q96D42 359 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 ABCG5Q9H222 651 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 PPIL3Q9H2H8 161 aaKnown RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 OPA3Q9H6K4 179 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 hCG_38984A0A1B0GV85 526 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 LINC00854A0A1B0GVQ3 168 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 A0A1W2PPR1 153 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 ZNF879B4DU55 563 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 PDCD5O14737 125 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 TIMM8AO60220 97 aaPredicted RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 MTRF1O75570 445 aaKnown RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 IGLV3-1P01715 115 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 ZNF250P15622 560 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 KLF3P57682 345 aaPredicted RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 Q5BKY6 102 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 CEP78Q5JTW2 689 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 TMEM200AQ86VY9 491 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 OR5AS1Q8N127 324 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 OR56B2PQ8NGI1 322 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 OR51A4Q8NGJ6 313 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 OR13C3Q8NGS6 347 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 GPR148Q8TDV2 347 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 SMIM4Q8WVI0 70 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 RGP1Q92546 391 aaPredicted RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 THRSPQ92748 146 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 YIPF5Q969M3 257 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 MRPL24Q96A35 216 aaKnown RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 DHRS9Q9BPW9 319 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 MRPL37Q9BZE1 423 aaKnown RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 CLEC4MQ9H2X3 399 aaPredicted RBP12.37□□□□□ -0.43
LINC00339-208ENST00000634934 PLK3Q9H4B4 646 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 UBTD1Q9HAC8 227 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 MCUBQ9NWR8 336 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 NPTNQ9Y639 398 aa12.37□□□□□ -0.43
LINC00339-208ENST00000634934 PLCE1Q9P212 2302 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 FAM221AA4D161 298 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 A6NIN4 97 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 CD300LBA8K4G0 201 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 HS3ST1O14792 307 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 LMX1BO60663 402 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 PRAF2O60831 178 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 DHRS3O75911 302 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 SELEP16581 610 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 CCL1P22362 96 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 APOBEC3AP31941 199 aaPredicted RBP12.36□□□□□ -0.43
LINC00339-208ENST00000634934 SERPINF1P36955 418 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 MAGEB1P43366 347 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 SOX2P48431 317 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 TLE4Q04727 773 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 INSL4Q14641 139 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 ALKBH6Q3KRA9 238 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 UBE2NLQ5JXB2 153 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 LAMTOR1Q6IAA8 161 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 BTN2A1Q7KYR7 527 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 PLPP7Q8NBV4 271 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms