RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 BCKDHBP21953 392 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 APOBEC1P41238 236 aaKnown RBP7.68□□□□□ -1.18
VCL-207ENST00000624354 RPS10P46783 165 aaKnown RBP7.68□□□□□ -1.18
VCL-207ENST00000624354 OR3A2P47893 321 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 FOXK1P85037 733 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 GAMTQ14353 236 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 SURF2Q15527 256 aaPredicted RBP7.68□□□□□ -1.18
VCL-207ENST00000624354 PLAC9Q5JTB6 97 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 UNQ6494/PRO21346Q6UXR6 183 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 ABHD12BQ7Z5M8 362 aaPredicted RBP7.68□□□□□ -1.18
VCL-207ENST00000624354 C1QL4Q86Z23 238 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 WDFY1Q8IWB7 410 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 KDF1Q8NAX2 398 aaPredicted RBP7.68□□□□□ -1.18
VCL-207ENST00000624354 TMEM104Q8NE00 496 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 CCDC54Q8NEL0 328 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 DDIT4LQ96D03 193 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 MOB1AQ9H8S9 216 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 SUSD2Q9UGT4 822 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 CD207Q9UJ71 328 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 MED12Q93074 2177 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 A0A0A6YYD4 124 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 C2orf72A6NCS6 295 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 ANKUB1A6NFN9 424 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 CDC14BO60729 498 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 HCKP08631 526 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 LYL1P12980 280 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 AMY2BP19961 511 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 NUBP1P53384 320 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 C17orf67Q0P5P2 114 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 Q6ZS52 159 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 ZNF441Q8N8Z8 693 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 OR2AJ1Q8NGZ0 328 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 C2orf50Q96LR7 162 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 OR5B2Q96R09 309 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 GPER1Q99527 375 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 URM1Q9BTM9 101 aaKnown RBP7.68□□□□□ -1.18
VCL-207ENST00000624354 BANF2Q9H503 90 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 ANAPC10Q9UM13 185 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 WASF3Q9UPY6 502 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 VDAC3Q9Y277 283 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 A0A1W2PPE2 198 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 VSTM2BA6NLU5 285 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 ZNF878C9JN71 531 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 H3BML4 177 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 STMND1H3BQB6 276 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 LRP3O75074 770 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 CSTBP04080 98 aaKnown RBP7.68□□□□□ -1.18
VCL-207ENST00000624354 FOSL2P15408 326 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 SULT1A1P50225 295 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 RAB32Q13637 225 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 OR10S1Q8NGN2 331 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 S100A13Q99584 98 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 CDX2Q99626 313 aaPredicted RBP7.68□□□□□ -1.18
VCL-207ENST00000624354 SOX7Q9BT81 388 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 VN1R1Q9GZP7 353 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 PRR13Q9NZ81 148 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 GSKIPQ9P0R6 139 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 DNAJB11Q9UBS4 358 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 SRPK3Q9UPE1 567 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 TP53TG5Q9Y2B4 290 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 B3GALT5Q9Y2C3 310 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 MEMO1Q9Y316 297 aa7.68□□□□□ -1.18
VCL-207ENST00000624354 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 FAM157AC9JC47 383 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 CRTAPO75718 401 aaPredicted RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 SLC2A1P11166 492 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 OR3A4PP47883 348 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 TMEM50BP56557 158 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 S100A10P60903 97 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 ANKRD55Q3KP44 614 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 BTNL8Q6UX41 500 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 RNF144BQ7Z419 303 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 PEG10Q86TG7 708 aaKnown RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 PPP1R3BQ86XI6 285 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 BHLHE23Q8NDY6 225 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 NUDT22Q9BRQ3 303 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 SUCNR1Q9BXA5 334 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 SLC26A1Q9H2B4 701 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 TAF9BQ9HBM6 251 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 SPACA1Q9HBV2 294 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 SERINC1Q9NRX5 453 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 DOK5Q9P104 306 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 SEC14L6B5MCN3 397 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 H3BMH7 237 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 TAAR5O14804 337 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 ZNF354AO60765 605 aaPredicted RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 F10P00742 488 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 IGLV3-19P01714 112 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 CD81P60033 236 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 SUPT4H1P63272 117 aaKnown RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 HSD11B2P80365 405 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 THEM4Q5T1C6 240 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 C1orf189Q5VU69 101 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 OR5AS1Q8N127 324 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 OR51F2Q8NH61 342 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 ARHGAP5-AS1Q96IT6 56 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 FAM71F1Q96KD3 344 aaPredicted RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 OR10C1Q96KK4 312 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 ST6GALNAC5Q9BVH7 336 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 TPSD1Q9BZJ3 242 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms