RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GIN1Q9NXP7 522 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 OR51B4Q9Y5P0 310 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 CNTNAP1P78357 1384 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 MROH7Q68CQ1 1323 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 MYO10Q9HD67 2058 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF816-ZNF321PA0A0X1KG74 233 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 TINCRA0A1B0GVN0 87 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 MIF4GDA9UHW6 222 aaKnown RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 DISC1C4P0D8 188 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 F5H5T6 163 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 OR2B3O76000 313 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 IFNA21P01568 189 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 CD8AP01732 235 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 PPBPP02775 128 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 CD74P04233 296 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 CD5P06127 495 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 CST2P09228 141 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 LINC00614P0C842 121 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 UGT2B7P16662 529 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 ALOX5APP20292 161 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 SERPINA2P20848 420 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 HTR1EP28566 365 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 RPA3P35244 121 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 RBMXP38159 391 aaKnown RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 KIR2DS4P43632 304 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 AQP5P55064 265 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 FGF8P55075 233 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 PAFAH1B2P68402 229 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 SEMG2Q02383 582 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 RPL18AQ02543 176 aaKnown RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 BCL2L1Q07817 233 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 PUDPQ08623 228 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF154Q13106 437 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 TFDP2Q14188 446 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 TOMM34Q15785 309 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 TRIM40Q6P9F5 258 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 CASP12Q6UXS9 341 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 SLC36A1Q7Z2H8 476 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 S100A7AQ86SG5 101 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 CLVS1Q8IUQ0 354 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 SLC30A8Q8IWU4 369 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 NRMQ8IXM6 262 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 OR6V1Q8N148 313 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 SVOPLQ8N434 492 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 OR5B3Q8NH48 314 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 RAB8BQ92930 207 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 RCN3Q96D15 328 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 FAM210BQ96KR6 192 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 RBP7Q96R05 134 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 KCTD14Q9BQ13 255 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 CHIAQ9BZP6 476 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 BOLA2Q9H3K6 86 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 SIAEQ9HAT2 523 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 RHOFQ9HBH0 211 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 ACOT13Q9NPJ3 140 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 PARVAQ9NVD7 372 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 TREM2Q9NZC2 230 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 EHFQ9NZC4 300 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 SAMD4AQ9UPU9 718 aaKnown RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 FARSAQ9Y285 508 aaKnown RBP2.7□□□□□ -1.98
BRCA1-229ENST00000621897 NDUFAF1Q9Y375 327 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 L3MBTL1Q9Y468 752 aa2.7□□□□□ -1.98
BRCA1-229ENST00000621897 PTPRGP23470 1445 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 CEP152O94986 1710 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 A0A1B0GW55 424 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 SMIM9A6NGZ8 99 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 EFCAB9A8MZ26 197 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 ANKRD63C9JTQ0 380 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 SMKR1H3BMG3 65 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 M0QZK8 103 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 FCN1O00602 326 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 FABP7O15540 132 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 ENSAO43768 121 aaKnown RBP2.69□□□□□ -1.98
BRCA1-229ENST00000621897 RAD1O60671 282 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 ENTPD6O75354 484 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 SLC22A5O76082 557 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 TYMSP04818 313 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 H2AFZP0C0S5 128 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 OR5AL1P0C617 328 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 OR8U9P0C7N5 309 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DUX4L2P0CJ85 424 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DUX4L3P0CJ86 424 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DUX4L5P0CJ88 424 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DUX4L6P0CJ89 424 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DUX4L7P0CJ90 424 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 SCGB1A1P11684 91 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 RAB5AP20339 215 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 F8A1P23610 371 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 MPIP34949 423 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 RORCP51449 518 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DLX6P56179 175 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 TGFBR3Q03167 851 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 OR2F1Q13607 317 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 TRAM1Q15629 374 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 ATP6AP1Q15904 470 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DEFB115Q30KQ5 88 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 FAM27D1Q5T7N8 215 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF57Q68EA5 555 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DUX4L9Q6RFH8 374 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM179BQ7Z7N9 219 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms