RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 COPZ2Q9P299 210 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 NUBP2Q9Y5Y2 271 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 EEF1E1-BLOC1S5C9J1V9 151 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 ICMTO60725 284 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 TCRBP04435 133 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 BMP5P22003 454 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 UCP2P55851 309 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 KLRB1Q12918 225 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 FBXW12Q6X9E4 464 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 FJX1Q86VR8 437 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 OR1J1Q8NGS3 322 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 PIEZO2Q9H5I5 2752 aa18.45■□□□□ 0.54
SPAST-204ENST00000621856 MSTNO14793 375 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 SLC34A2O95436 690 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 CECR9P0C854 216 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 CPT2P23786 658 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 PDZK1IP1Q13113 114 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 CEACAM21Q3KPI0 293 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 TMEM255AQ5JRV8 349 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 TRAPPC6BQ86SZ2 158 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 OR2J1Q9GZK6 312 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 PIGMQ9H3S5 423 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 ZNF629Q9UEG4 869 aaPredicted RBP18.44■□□□□ 0.54
SPAST-204ENST00000621856 SLC25A15Q9Y619 301 aa18.44■□□□□ 0.54
SPAST-204ENST00000621856 TRAV6A0A075B6T7 132 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 A0A0G2JNJ9 132 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 PQLC2LA1A4F0 135 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 MELTFP08582 738 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 GSTP1P09211 210 aaKnown RBP18.43■□□□□ 0.54
SPAST-204ENST00000621856 AKAIN1P0CW23 69 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 HIST1H1DP16402 221 aaKnown RBP18.43■□□□□ 0.54
SPAST-204ENST00000621856 RAB25P57735 213 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 ERVS71-1P61550 626 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 TATDN3Q17R31 274 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 FAAP20Q6NZ36 180 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 ASCL4Q6XD76 172 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 RTN4RL2Q86UN3 420 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 FAM89BQ8N5H3 189 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 PXT1Q8NFP0 134 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 OR8S1Q8NH09 359 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 SLC25A40Q8TBP6 338 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 NUDCD2Q8WVJ2 157 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 HPSE2Q8WWQ2 592 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 DEDD2Q8WXF8 326 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 DVL3Q92997 716 aaPredicted RBP18.43■□□□□ 0.54
SPAST-204ENST00000621856 S100PBPQ96BU1 408 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 TM2D1Q9BX74 207 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 NUDT15Q9NV35 164 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 Q9UFV3 132 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 MPC1Q9Y5U8 109 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 ZNF780AO75290 641 aaPredicted RBP18.43■□□□□ 0.54
SPAST-204ENST00000621856 IGLV1-44P01699 117 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 PSMB1P20618 241 aaKnown RBP18.43■□□□□ 0.54
SPAST-204ENST00000621856 GPM6AP51674 278 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 GNG2P59768 71 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 PLAC9Q5JTB6 97 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 TIMM23BQ5SRD1 257 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 UNQ6126/PRO20091Q6UXV3 157 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 HPS1Q92902 700 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 NPAP1Q9NZP6 1156 aa18.43■□□□□ 0.54
SPAST-204ENST00000621856 A0A0B4J293 547 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 IGHV1-18A0A0C4DH31 117 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 ZNF732B4DXR9 585 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 LILRA1O75019 489 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 CYB5AP00167 134 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 ZNF35P13682 527 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 BLVRBP30043 206 aaPredicted RBP18.42■□□□□ 0.54
SPAST-204ENST00000621856 TMEM50BP56557 158 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 TAS2R19P59542 299 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 BTG1P62324 171 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 ALKBH2Q6NS38 261 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 BTN2A1Q7KYR7 527 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 CALHM1Q8IU99 346 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 ZNF611Q8N823 705 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 FAM169BQ8N8A8 192 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 TMEM229BQ8NBD8 167 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 OR5A2Q8NGI9 324 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 OR4C16Q8NGL9 310 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 OR51F2Q8NH61 342 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 ARHGAP5-AS1Q96IT6 56 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 FGF23Q9GZV9 251 aaPredicted RBP18.42■□□□□ 0.54
SPAST-204ENST00000621856 IFT46Q9NQC8 304 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 ALG5Q9Y673 324 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 ATMQ13315 3056 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 PIEZO1Q92508 2521 aa18.42■□□□□ 0.54
SPAST-204ENST00000621856 SPENQ96T58 3664 aaKnown RBP18.42■□□□□ 0.54
SPAST-204ENST00000621856 IGKV1-12A0A0C4DH73 117 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 A8MXE2 369 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 IGKV1D-12P01611 117 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 CD3DP04234 171 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 GABRR1P24046 479 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 RCVRNP35243 200 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 RAD52P43351 418 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 STEAP1BQ6NZ63 245 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 ZNF782Q6ZMW2 699 aaPredicted RBP18.41■□□□□ 0.54
SPAST-204ENST00000621856 NCCRP1Q6ZVX7 275 aaPredicted RBP18.41■□□□□ 0.54
SPAST-204ENST00000621856 SLC25A26Q70HW3 274 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 AKAP14Q86UN6 197 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 CHAC2Q8WUX2 184 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 Q96M66 194 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms