RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 OR51I2Q9H344 312 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 SIGLEC9Q9Y336 463 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 MAB21L2Q9Y586 359 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 MPC1Q9Y5U8 109 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 PLXNB1O43157 2135 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 KMT2CQ8NEZ4 4911 aaKnown RBP9.34□□□□□ -0.91
CPNE3-210ENST00000621245 A0A1B0GUS0 222 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 TMEM210A6NLX4 147 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 ANXA2P2A6NMY6 339 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 SIGLEC5O15389 551 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 PRODHO43272 600 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 CLPXO76031 633 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 IGLV3-1P01715 115 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 PSG2P11465 335 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 OSMP13725 252 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 FAHP16930 419 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 PAICSP22234 425 aaKnown RBP9.34□□□□□ -0.91
CPNE3-210ENST00000621245 MNAT1P51948 309 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 RPS7P62081 194 aaKnown RBP9.34□□□□□ -0.91
CPNE3-210ENST00000621245 IL5RAQ01344 420 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 FAM76BQ5HYJ3 339 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 METAP1DQ6UB28 335 aaPredicted RBP9.34□□□□□ -0.91
CPNE3-210ENST00000621245 PLEKHG7Q6ZR37 379 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 C1QL4Q86Z23 238 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 ZSCAN4Q8NAM6 433 aaPredicted RBP9.34□□□□□ -0.91
CPNE3-210ENST00000621245 ZNRF1Q8ND25 227 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 OR10Z1Q8NGY1 313 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 PPP1R35Q8TAP8 253 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 OR51E1Q8TCB6 317 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 LRGUKQ96M69 825 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 FANCD2OSQ96PS1 177 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 RGCCQ9H4X1 137 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 NIPAL2Q9H841 368 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 SLC25A19Q9HC21 320 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 C19orf12Q9NSK7 152 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 NLKQ9UBE8 527 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 SLC25A10Q9UBX3 287 aaPredicted RBP9.34□□□□□ -0.91
CPNE3-210ENST00000621245 VPREB3Q9UKI3 123 aa9.34□□□□□ -0.91
CPNE3-210ENST00000621245 ZNF816-ZNF321PA0A0X1KG74 233 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 MEIOCA2RUB1 952 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 A6NIN4 97 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 NKX6-3A6NJ46 265 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 OR2AT4A6NND4 320 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 ZNF732B4DXR9 585 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 RGS13O14921 159 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 SYNGR1O43759 233 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 PRKYO43930 277 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 SRSF10O75494 262 aaKnown RBP9.33□□□□□ -0.92
CPNE3-210ENST00000621245 APOC1P02654 83 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 ACAA1P09110 424 aaPredicted RBP9.33□□□□□ -0.92
CPNE3-210ENST00000621245 FBP1P09467 338 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 NDUFB7P17568 137 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 GLRA1P23415 457 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 CFL1P23528 166 aaKnown RBP9.33□□□□□ -0.92
CPNE3-210ENST00000621245 GABRA2P47869 451 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 LRRC10Q5BKY1 277 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 KRT77Q7Z794 578 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.33□□□□□ -0.92
CPNE3-210ENST00000621245 CD177Q8N6Q3 437 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 CCDC197Q8NCU1 140 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 DUS3LQ96G46 650 aaKnown RBP9.33□□□□□ -0.92
CPNE3-210ENST00000621245 TEAD3Q99594 435 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 PBOV1Q9GZY1 135 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 YY1AP1Q9H869 796 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 GPR84Q9NQS5 396 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 LAMP5Q9UJQ1 280 aa9.33□□□□□ -0.92
CPNE3-210ENST00000621245 A0A1W2PQ09 198 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 MEX3AA1L020 520 aaKnown RBP9.32□□□□□ -0.92
CPNE3-210ENST00000621245 AQP12BA6NM10 295 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 GNGT2O14610 69 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 MITFO75030 526 aaPredicted RBP9.32□□□□□ -0.92
CPNE3-210ENST00000621245 FKBP6O75344 327 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 E2F6O75461 281 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 FAM107AO95990 144 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 EPHA2P29317 976 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 DAPP51397 102 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 CBX1P83916 185 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 EGR3Q06889 387 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 LY6EQ16553 131 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 C21orf62-AS1Q17RA5 79 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 FOXB2Q5VYV0 432 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 PLCXD3Q63HM9 321 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 DHRS7BQ6IAN0 325 aaPredicted RBP9.32□□□□□ -0.92
CPNE3-210ENST00000621245 HAGHLQ6PII5 290 aaPredicted RBP9.32□□□□□ -0.92
CPNE3-210ENST00000621245 MOB3CQ70IA8 216 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 KRT74Q7RTS7 529 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 SPATA24Q86W54 205 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 AQP12AQ8IXF9 295 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 FAM185AQ8N0U4 392 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 TMEM185AQ8NFB2 350 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 FAM81AQ8TBF8 368 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 AQP3Q92482 292 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 DNTTIP1Q9H147 329 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 PPA2Q9H2U2 334 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 C16orf95Q9H693 158 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 TVP23BQ9NYZ1 205 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 FAM96BQ9Y3D0 163 aa9.32□□□□□ -0.92
CPNE3-210ENST00000621245 COL7A1Q02388 2944 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 A0A0U1RQV5 110 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 TMEM269A0A1B0GVZ9 245 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms