RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 A0A1B0GW55 424 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 SLC22A31A6NKX4 558 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 ZNF732B4DXR9 585 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 H0YAE9 185 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 SLC1A7O00341 560 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DUX4L2P0CJ85 424 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DUX4L3P0CJ86 424 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DUX4L4P0CJ87 422 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DUX4L5P0CJ88 424 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DUX4L6P0CJ89 424 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DUX4L7P0CJ90 424 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 AMY2BP19961 511 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 SLC2A5P22732 501 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 GABRA2P47869 451 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 APOFQ13790 326 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 FLOT2Q14254 428 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DGUOKQ16854 277 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 ZNF684Q5T5D7 378 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DUX4L9Q6RFH8 374 aaPredicted RBP9.76□□□□□ -0.85
UPF3B-204ENST00000619445 LIAT1Q6ZQX7 453 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 Q6ZSV7 163 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 ZNF573Q86YE8 665 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 TMEM185AQ8NFB2 350 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 TNFRSF14Q92956 283 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DUS3LQ96G46 650 aaKnown RBP9.76□□□□□ -0.85
UPF3B-204ENST00000619445 SDSLQ96GA7 329 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 LYZL4Q96KX0 146 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 TEAD3Q99594 435 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 HEXA-AS1Q9H8Q6 139 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 FAM206AQ9NX38 181 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DUX4Q9UBX2 424 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 FBLN5Q9UBX5 448 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 NUFIP1Q9UHK0 495 aaKnown RBP9.76□□□□□ -0.85
UPF3B-204ENST00000619445 ENOPH1Q9UHY7 261 aa9.76□□□□□ -0.85
UPF3B-204ENST00000619445 DHRS7CA6NNS2 312 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 DHRS3O75911 302 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 T-ENOLP0DO92 83 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 PSG2P11465 335 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 GMFBP60983 142 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 ESRRGP62508 458 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 CBX1P83916 185 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 PLCXD3Q63HM9 321 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 ASPHD2Q6ICH7 369 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 TRPM8Q7Z2W7 1104 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 SPATA24Q86W54 205 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 CALHM1Q8IU99 346 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 ZNF561Q8N587 486 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 OR51G2Q8NGK0 314 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 OR5K1Q8NHB7 308 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 AQP3Q92482 292 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 SEH1LQ96EE3 360 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 OR8B4Q96RC9 309 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 CNN2Q99439 309 aaKnown RBP9.75□□□□□ -0.85
UPF3B-204ENST00000619445 PBOV1Q9GZY1 135 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 RANBP3Q9H6Z4 567 aaPredicted RBP9.75□□□□□ -0.85
UPF3B-204ENST00000619445 PPP1R3EQ9H7J1 279 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 PAPOLBQ9NRJ5 636 aaKnown RBP9.75□□□□□ -0.85
UPF3B-204ENST00000619445 ZNF222Q9UK12 451 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 IGKV1D-17A0A075B6S4 117 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 DLGAP1O14490 977 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 GYG2O15488 501 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 NRASP01111 189 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 IGLV3-1P01715 115 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 GABRA5P31644 462 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 CAPZA1P52907 286 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 CRISP1P54107 249 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 SRSF4Q08170 494 aaKnown RBP9.75□□□□□ -0.85
UPF3B-204ENST00000619445 CLVS2Q5SYC1 327 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 HAGHLQ6PII5 290 aaPredicted RBP9.75□□□□□ -0.85
UPF3B-204ENST00000619445 Q6ZTK2 550 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 TMEM179BQ7Z7N9 219 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 FGFRL1Q8N441 504 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 POC1AQ8NBT0 407 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 OR4C13Q8NGP0 309 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 OR51E1Q8TCB6 317 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 MEGF9Q9H1U4 602 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 GPR84Q9NQS5 396 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 TVP23BQ9NYZ1 205 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 H2AFY2Q9P0M6 372 aaPredicted RBP9.75□□□□□ -0.85
UPF3B-204ENST00000619445 IKZF2Q9UKS7 526 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 PIGLQ9Y2B2 252 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 KLHDC2Q9Y2U9 406 aa9.75□□□□□ -0.85
UPF3B-204ENST00000619445 TET2Q6N021 2002 aaPredicted RBP9.74□□□□□ -0.85
UPF3B-204ENST00000619445 J3QT63 122 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 ANGPTL7O43827 346 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 NOS1APO75052 506 aaPredicted RBP9.74□□□□□ -0.85
UPF3B-204ENST00000619445 FKBP6O75344 327 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 RHBDL1O75783 438 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 SELLP14151 372 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 LGALS4P56470 323 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 RPL31P62899 125 aaKnown RBP9.74□□□□□ -0.85
UPF3B-204ENST00000619445 ELF3P78545 371 aaPredicted RBP9.74□□□□□ -0.85
UPF3B-204ENST00000619445 LRRC75BQ2VPJ9 315 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 CEP78Q5JTW2 689 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 ACP7Q6ZNF0 438 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 MOB3CQ70IA8 216 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 FAM185AQ8N0U4 392 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 ZNRF1Q8ND25 227 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 CCDC54Q8NEL0 328 aa9.74□□□□□ -0.85
UPF3B-204ENST00000619445 BBS1Q8NFJ9 593 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms