RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CDK5R1Q15078 307 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 OR52L2PQ8NGH6 319 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 MARCH1Q8TCQ1 289 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 CCL17Q92583 94 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 HGDQ93099 445 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 ALG1L2C9J202 215 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 CDAP32320 146 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 KCNJ3P48549 501 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 FUNDC1Q8IVP5 155 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 ZNF784Q8NCA9 323 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 ACP1P24666 158 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 TNFAIP6P98066 277 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 RTP5Q14D33 572 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 VAMP3Q15836 100 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 hADV38S2A0JD32 116 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 M0R1X1 148 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 SP1P08047 785 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 ID4P47928 161 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 OR2B8PP59922 312 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 KRTDAPP60985 99 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 ZNF154Q13106 437 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 ASCL5Q7RTU5 278 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 C1orf210Q8IVY1 113 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 FOXB1Q99853 325 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 CLEC2LP0C7M8 214 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 PGA3P0DJD8 388 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 ZNF26P17031 533 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 DGCR2P98153 550 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 CXorf67Q86X51 503 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 TMED6Q8WW62 240 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 TNRC6CQ9HCJ0 1690 aaKnown RBP10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 PSME4Q14997 1843 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 CALCRP30988 508 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 FOXF1Q12946 379 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 SOWAHCQ53LP3 525 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 RAB1CQ92928 201 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 UBE2FQ969M7 185 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 CYSLTR2Q9NS75 346 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 OR6C3Q9NZP0 311 aa10.03□□□□□ -0.8
CCDC144B-208ENST00000618081 GREB1Q4ZG55 1949 aa10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 DHHO43323 396 aa10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 KRASP01116 189 aa10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 TFAP2AP05549 437 aa10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 RBPMS2Q6ZRY4 209 aaKnown RBP10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 LYG1Q8N1E2 194 aa10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 EIF4E3Q8N5X7 224 aaKnown RBP10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 OR1L4Q8NGR5 311 aa10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 AKR7LQ8NHP1 331 aa10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 NUDCD2Q8WVJ2 157 aa10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 MAGT1Q9H0U3 335 aa10.02□□□□□ -0.8
CCDC144B-208ENST00000618081 SPRY1O43609 319 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 CTSLP07711 333 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 RXFP4Q8TDU9 374 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 NOL4LQ96MY1 436 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 NTN4Q9HB63 628 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 NACAE9PAV3 2078 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 A0A0A6YYD5 115 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 TO15178 435 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 SLC25A5P05141 298 aaKnown RBP10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 FDX2Q6P4F2 183 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 MED30Q96HR3 178 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 ZNF629Q9UEG4 869 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 ZNF574Q6ZN55 896 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 TMEM229BQ8NBD8 167 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 TM4SF19Q96DZ7 209 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 MRGPRX3Q96LB0 322 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 MTCH2Q9Y6C9 303 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 CXorf51AA0A1B0GTR3 108 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 METTL12A8MUP2 240 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 ARNTP27540 789 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 MPLP40238 635 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 MMP15P51511 669 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 B3GNTL1Q67FW5 361 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 PCNPQ8WW12 178 aaKnown RBP10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 FZR1Q9UM11 496 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 B9D1Q9UPM9 204 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 RCL1Q9Y2P8 373 aaKnown RBP10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 LRP12Q9Y561 859 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 ABCA7Q8IZY2 2146 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 CYR61O00622 381 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 GALNT16Q8N428 558 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 PPP1R1CQ8WVI7 109 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 VAMP8Q9BV40 100 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 CLEC5AQ9NY25 188 aa10.02□□□□□ -0.81
CCDC144B-208ENST00000618081 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 DHRS3O75911 302 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 CD37P11049 281 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 SFTPCP11686 197 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 PJVKQ0ZLH3 352 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 ZNF788Q6ZQV5 615 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 CMBLQ96DG6 245 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 GLRX2Q9NS18 164 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 CHD3Q12873 2000 aaKnown RBP10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 TRIOBPQ9H2D6 2365 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 A0A1W2PPQ1 181 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 K7ESF4 209 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 ACVR1Q04771 509 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 ZNF260Q3ZCT1 412 aa10.01□□□□□ -0.81
CCDC144B-208ENST00000618081 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms