RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 U3KQV3 271 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 hCG_1809904A0A1W2PP81 198 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 A0A1W2PPE2 198 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 A0A1W2PR64 198 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 A0A1W2PRV1 198 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 ACOD1A6NK06 481 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 ZNF732B4DXR9 585 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 H3BN98 237 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 XPNPEP2O43895 674 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 ALX3O95076 343 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 CEACAM21Q3KPI0 293 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 MKXQ8IYA7 352 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 C11orf44Q8N8P7 122 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 OR10G2Q8NGC3 310 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 OR5A2Q8NGI9 324 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 FAM107BQ9H098 131 aa17.19■□□□□ 0.34
PNKP-212ENST00000599454 A0A0U1RQV5 110 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 TCRBV5S2A0A599 114 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 PRR23D1E9PI22 279 aaPredicted RBP17.18■□□□□ 0.34
PNKP-212ENST00000599454 PRODHO43272 600 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 SELENOFO60613 162 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 MTRF1O75570 445 aaKnown RBP17.18■□□□□ 0.34
PNKP-212ENST00000599454 PRR23D2P0DMB1 279 aaPredicted RBP17.18■□□□□ 0.34
PNKP-212ENST00000599454 VSIG10L2P0DP72 767 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 ATP6V1B1P15313 513 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 CAPZA1P52907 286 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 EMX1Q04741 257 aaPredicted RBP17.18■□□□□ 0.34
PNKP-212ENST00000599454 SMIM21Q3B7S5 101 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 THAP5Q7Z6K1 395 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 IQCF1Q8N6M8 205 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 OR4S1Q8NGB4 309 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 NIPSNAP1Q9BPW8 284 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 CDCA4Q9BXL8 241 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 YY1AP1Q9H869 796 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 C19orf12Q9NSK7 152 aa17.18■□□□□ 0.34
PNKP-212ENST00000599454 CHST1O43916 411 aa17.17■□□□□ 0.34
PNKP-212ENST00000599454 LGALS4P56470 323 aa17.17■□□□□ 0.34
PNKP-212ENST00000599454 RPL31P62899 125 aaKnown RBP17.17■□□□□ 0.34
PNKP-212ENST00000599454 FAM98BQ52LJ0 330 aaKnown RBP17.17■□□□□ 0.34
PNKP-212ENST00000599454 ZNF561Q8N587 486 aa17.17■□□□□ 0.34
PNKP-212ENST00000599454 AQP3Q92482 292 aa17.17■□□□□ 0.34
PNKP-212ENST00000599454 ARL8BQ9NVJ2 186 aa17.17■□□□□ 0.34
PNKP-212ENST00000599454 USE1Q9NZ43 259 aa17.17■□□□□ 0.34
PNKP-212ENST00000599454 ARRDC5A6NEK1 342 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 VGLL3A8MV65 326 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 SLC1A7O00341 560 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 FBXO24O75426 580 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 MNAT1P51948 309 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 ERVFRD-1P60508 538 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 CEP78Q5JTW2 689 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 SLC35D3Q5M8T2 416 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 ZBTB37Q5TC79 503 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 LCN8Q6JVE9 175 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 PLBD1Q6P4A8 553 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 HAGHLQ6PII5 290 aaPredicted RBP17.16■□□□□ 0.34
PNKP-212ENST00000599454 DEGS2Q6QHC5 323 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 ACP7Q6ZNF0 438 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 KRT77Q7Z794 578 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 ARHGAP24Q8N264 748 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 POC1AQ8NBT0 407 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 PIFOQ8TCI5 191 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 GIPC3Q8TF64 312 aa17.16■□□□□ 0.34
PNKP-212ENST00000599454 RFPL4AA6NLU0 287 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 RFPL4AL1F8VTS6 287 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 PRB2P02812 416 aaPredicted RBP17.15■□□□□ 0.34
PNKP-212ENST00000599454 HMGN1P05114 100 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 ALOX5APP20292 161 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 RIPPLY1Q0D2K3 151 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 TMEM200BQ69YZ2 307 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 HIST2H2BDQ6DRA6 164 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 KCTD18Q6PI47 426 aaPredicted RBP17.15■□□□□ 0.34
PNKP-212ENST00000599454 DHFR2Q86XF0 187 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 CALHM1Q8IU99 346 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 Q8N2B8 174 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 C11orf42Q8N5U0 333 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 MRAPQ8TCY5 172 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 FEVQ99581 238 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 LAMP5Q9UJQ1 280 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 KLHDC2Q9Y2U9 406 aa17.15■□□□□ 0.34
PNKP-212ENST00000599454 BMXP51813 675 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 LOXL3P58215 753 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 MOB3CQ70IA8 216 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 TRPM8Q7Z2W7 1104 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 NDUFA11Q86Y39 141 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 CD177Q8N6Q3 437 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 OR4F17Q8NGA8 305 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 OR4F4Q96R69 305 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 NKX3-1Q99801 234 aaPredicted RBP17.14■□□□□ 0.33
PNKP-212ENST00000599454 ZNF702PQ9H963 129 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 NECAP2Q9NVZ3 263 aa17.14■□□□□ 0.33
PNKP-212ENST00000599454 TMEM269A0A1B0GVZ9 245 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 MEGF11A6BM72 1044 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 FAM90A8PA6NJQ4 464 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 GSC2O15499 205 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 COX7A1P24310 79 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 PAX6P26367 422 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 PRDX2P32119 198 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 TRIM25Q14258 630 aaKnown RBP17.13■□□□□ 0.33
PNKP-212ENST00000599454 GINS1Q14691 196 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 NSUN5P1Q3KNT7 163 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms