RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 C12orf54Q6X4T0 127 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 ZBTB49Q6ZSB9 765 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 C9orf139Q6ZV77 190 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 SIGLECL1Q8N7X8 197 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 DNTTIP1Q9H147 329 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 ESM1Q9NQ30 184 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 GNG8Q9UK08 70 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 IGHV3OR16-10A0A075B7F0 116 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 A0A1B0GVI7 797 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 SNTNA6NMZ2 147 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 DLGAP1O14490 977 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 LIPFP07098 398 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 GLRA1P23415 457 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 ZNF91Q05481 1191 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 ZSCAN26Q16670 478 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 ODF4Q2M2E3 257 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 ATPAF1Q5TC12 328 aaPredicted RBP12.5□□□□□ -0.41
TRIM28-205ENST00000595028 HAGHLQ6PII5 290 aaPredicted RBP12.5□□□□□ -0.41
TRIM28-205ENST00000595028 RBMS3Q6XE24 437 aaKnown RBP12.5□□□□□ -0.41
TRIM28-205ENST00000595028 BTN2A1Q7KYR7 527 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 ENTHD1Q8IYW4 607 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 BCL6BQ8N143 479 aaPredicted RBP12.5□□□□□ -0.41
TRIM28-205ENST00000595028 PRSS35Q8N3Z0 413 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 FGFRL1Q8N441 504 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 ZDHHC22Q8N966 263 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 PNLDC1Q8NA58 520 aaKnown RBP12.5□□□□□ -0.41
TRIM28-205ENST00000595028 AQP3Q92482 292 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 STMN2Q93045 179 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 PLEKHA1Q9HB21 404 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 GPR173Q9NS66 373 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 SNTG1Q9NSN8 517 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 NLKQ9UBE8 527 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 AASSQ9UDR5 926 aa12.5□□□□□ -0.41
TRIM28-205ENST00000595028 RPUSD1Q9UJJ7 312 aaKnown RBP12.5□□□□□ -0.41
TRIM28-205ENST00000595028 LOC107986453A0A1B0GWG9 222 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 PQLC2LA1A4F0 135 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 ANKRD61A6NGH8 418 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 SYT7O43581 403 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 NDUFB3O43676 98 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 MPZL2O60487 215 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 SFTPBP07988 381 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 UBCP0CG48 685 aaKnown RBP12.49□□□□□ -0.41
TRIM28-205ENST00000595028 SELLP14151 372 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 MMP9P14780 707 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 KIR3DL2P43630 455 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 TGM4P49221 684 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 IKZF1Q13422 519 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 CDONQ4KMG0 1287 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 ZNF788Q6ZQV5 615 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 CCDC54Q8NEL0 328 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 OR5T2Q8NGG2 359 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 ANGPTL6Q8NI99 470 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 ZNF671Q8TAW3 534 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 FAM216AQ8WUB2 273 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
TRIM28-205ENST00000595028 LGALS12Q96DT0 336 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 ZNF48Q96MX3 618 aaPredicted RBP12.49□□□□□ -0.41
TRIM28-205ENST00000595028 GAFA1Q96PS6 74 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 TBX15Q96SF7 602 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 PCGF1Q9BSM1 259 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
TRIM28-205ENST00000595028 SIRPDQ9H106 197 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 TRRAPQ9Y4A5 3859 aa12.49□□□□□ -0.41
TRIM28-205ENST00000595028 LOC100130705A0A1B0GUX0 176 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 DAPL1A0PJW8 107 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 A6NIN4 97 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 OR2AT4A6NND4 320 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 H3BSH0 61 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 J3QT63 122 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 GPR37O15354 613 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 SIGLEC5O15389 551 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 SLC16A6O15403 523 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 BAG2O95816 211 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 TFF1P04155 84 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 DBTP11182 482 aaKnown RBP12.48□□□□□ -0.41
TRIM28-205ENST00000595028 HAAOP46952 286 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 UBA52P62987 128 aaKnown RBP12.48□□□□□ -0.41
TRIM28-205ENST00000595028 IL13RA1P78552 427 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 LRRC10Q5BKY1 277 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 GPR157Q5UAW9 335 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 METTL11BQ5VVY1 283 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 ZNF573Q86YE8 665 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 ACBD7Q8N6N7 88 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 POC1AQ8NBT0 407 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 RHOXF1Q8NHV9 184 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 TMIGD2Q96BF3 282 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 RDH12Q96NR8 316 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 WDFY2Q96P53 400 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 CHST5Q9GZS9 411 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 FAM118AQ9NWS6 357 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 SMPD3Q9NY59 655 aaPredicted RBP12.48□□□□□ -0.41
TRIM28-205ENST00000595028 ZNF222Q9UK12 451 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 EXOGQ9Y2C4 368 aaKnown RBP12.48□□□□□ -0.41
TRIM28-205ENST00000595028 PCDHGB1Q9Y5G3 927 aa12.48□□□□□ -0.41
TRIM28-205ENST00000595028 IGKV1D-17A0A075B6S4 117 aa12.47□□□□□ -0.41
TRIM28-205ENST00000595028 DNAJC9-AS1A6NH13 148 aa12.47□□□□□ -0.41
TRIM28-205ENST00000595028 SYNGR1O43759 233 aa12.47□□□□□ -0.41
TRIM28-205ENST00000595028 TOX4O94842 621 aa12.47□□□□□ -0.41
TRIM28-205ENST00000595028 PGA5P0DJD9 388 aa12.47□□□□□ -0.41
TRIM28-205ENST00000595028 MPZP25189 248 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms