RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 SAMHD1Q9Y3Z3 626 aaKnown RBP11.36□□□□□ -0.59
VMP1-209ENST00000588915 NOTCH3Q9UM47 2321 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 FAM183AA6NL82 134 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 ZNF732B4DXR9 585 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 MTRF1O75570 445 aaKnown RBP11.35□□□□□ -0.59
VMP1-209ENST00000588915 RHBDL1O75783 438 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 LGALS4P56470 323 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 LOXL3P58215 753 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 PPP1R8Q12972 351 aaKnown RBP11.35□□□□□ -0.59
VMP1-209ENST00000588915 HIST2H2BDQ6DRA6 164 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 DEGS2Q6QHC5 323 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 THAP5Q7Z6K1 395 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 MKXQ8IYA7 352 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 DEFB107AQ8IZN7 70 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 ZNF561Q8N587 486 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 C11orf42Q8N5U0 333 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 OR8B12Q8NGG6 310 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 FAM81AQ8TBF8 368 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 PIFOQ8TCI5 191 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 C17orf50Q8WW18 174 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 AQP3Q92482 292 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 OR51V1Q9H2C8 321 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 MUC13Q9H3R2 512 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 ZNF446Q9NWS9 450 aa11.35□□□□□ -0.59
VMP1-209ENST00000588915 ARRDC5A6NEK1 342 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 FAM90A8PA6NJQ4 464 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 PRR23D1E9PI22 279 aaPredicted RBP11.34□□□□□ -0.59
VMP1-209ENST00000588915 SLC1A7O00341 560 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 NOS1APO75052 506 aaPredicted RBP11.34□□□□□ -0.59
VMP1-209ENST00000588915 TFF1P04155 84 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 PRR23D2P0DMB1 279 aaPredicted RBP11.34□□□□□ -0.59
VMP1-209ENST00000588915 FAHP16930 419 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 ALOX5APP20292 161 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 MNAT1P51948 309 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 ERVFRD-1P60508 538 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 RPL31P62899 125 aaKnown RBP11.34□□□□□ -0.59
VMP1-209ENST00000588915 SMIM21Q3B7S5 101 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 SLC35D3Q5M8T2 416 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 LCN1P1Q5VSP4 162 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 TMEM200BQ69YZ2 307 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 CYP2R1Q6VVX0 501 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 ACP7Q6ZNF0 438 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 NDUFA11Q86Y39 141 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 ARHGAP24Q8N264 748 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 C11orf44Q8N8P7 122 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 OR4F17Q8NGA8 305 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 OR10G2Q8NGC3 310 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 OTULINQ96BN8 352 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 OR4F4Q96R69 305 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 YY1AP1Q9H869 796 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 ELL3Q9HB65 397 aaPredicted RBP11.34□□□□□ -0.59
VMP1-209ENST00000588915 NECAP2Q9NVZ3 263 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 USE1Q9NZ43 259 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 U3KQV3 271 aa11.34□□□□□ -0.59
VMP1-209ENST00000588915 TCRBV5S2A0A599 114 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 MEGF11A6BM72 1044 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 RFPL4AA6NLU0 287 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 RFPL4AL1F8VTS6 287 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 H3BN98 237 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 CHST1O43916 411 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 SELENOFO60613 162 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 FBXO24O75426 580 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 HMGN1P05114 100 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 VSIG10L2P0DP72 767 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 ATP6V1B2P21281 511 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 PRDX2P32119 198 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 CAPZA1P52907 286 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 RIPPLY1Q0D2K3 151 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 FAM98BQ52LJ0 330 aaKnown RBP11.33□□□□□ -0.6
VMP1-209ENST00000588915 LCN8Q6JVE9 175 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 KCTD18Q6PI47 426 aaPredicted RBP11.33□□□□□ -0.6
VMP1-209ENST00000588915 KRT77Q7Z794 578 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 POC1AQ8NBT0 407 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 MRAPQ8TCY5 172 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 MALSU1Q96EH3 234 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 NIPSNAP1Q9BPW8 284 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 C19orf12Q9NSK7 152 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 SERTAD4Q9NUC0 356 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 VNN3Q9NY84 501 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 PITPNC1Q9UKF7 332 aa11.33□□□□□ -0.6
VMP1-209ENST00000588915 TBL2Q9Y4P3 447 aaKnown RBP11.33□□□□□ -0.6
VMP1-209ENST00000588915 GSC2O15499 205 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 ZNF254O75437 659 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 IGLV3-1P01715 115 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 OXLD1Q5BKU9 147 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 CEP78Q5JTW2 689 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 PLBD1Q6P4A8 553 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 HAGHLQ6PII5 290 aaPredicted RBP11.32□□□□□ -0.6
VMP1-209ENST00000588915 TRPM8Q7Z2W7 1104 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 ZNF573Q86YE8 665 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 IQCF1Q8N6M8 205 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 CD177Q8N6Q3 437 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 OR2T27Q8NH04 317 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 GIPC3Q8TF64 312 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 WIPF2Q8TF74 440 aaPredicted RBP11.32□□□□□ -0.6
VMP1-209ENST00000588915 FOXRED1Q96CU9 486 aaPredicted RBP11.32□□□□□ -0.6
VMP1-209ENST00000588915 FEVQ99581 238 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 ZNF702PQ9H963 129 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 ARL8BQ9NVJ2 186 aa11.32□□□□□ -0.6
VMP1-209ENST00000588915 ENPP5Q9UJA9 477 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms