RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 LYSMD2Q8IV50 215 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 CMTM4Q8IZR5 234 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 OR5AS1Q8N127 324 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 ZNF808Q8N4W9 903 aaPredicted RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 ZNF611Q8N823 705 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 WDR31Q8NA23 367 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 ACBD4Q8NC06 268 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 CHST4Q8NCG5 386 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 OR4M2Q8NGB6 313 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 OR4D6Q8NGJ1 314 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 OR51T1Q8NGJ9 327 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 UBASH3BQ8TF42 649 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 DEDD2Q8WXF8 326 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 RNASE6Q93091 150 aaKnown RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 CMBLQ96DG6 245 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 MRPS24Q96EL2 167 aaKnown RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 RNF170Q96K19 258 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 SPACA5Q96QH8 159 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 GFI1Q99684 422 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 C7orf50Q9BRJ6 194 aaKnown RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 NUDT16L1Q9BRJ7 211 aaKnown RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 PLK3Q9H4B4 646 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 SCPEP1Q9HB40 452 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 RHOFQ9HBH0 211 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 GLS2Q9UI32 602 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 ERRFI1Q9UJM3 462 aaPredicted RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 CFAP54Q96N23 3096 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 TRAV18A0A075B6X5 111 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 A0A1W2PQ09 198 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 LRP5LA4QPB2 252 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 NAP1L6A6NFF2 107 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 A6NLC8 198 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 ZNF732B4DXR9 585 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 SULT1C2O00338 296 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 ABCD4O14678 606 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 CDC14BO60729 498 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 CTAG2O75638 210 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 RBBP9O75884 186 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 LPLP06858 475 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 CD3EP07766 207 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 GSTP1P09211 210 aaKnown RBP5.32□□□□□ -1.56
LIG3-206ENST00000586058 ZNF35P13682 527 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 CA6P23280 308 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 GABRR1P24046 479 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 GLRXP35754 106 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 ALDH3B1P43353 468 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 CBX5P45973 191 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 HAAOP46952 286 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 VEGFCP49767 419 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 FAM27E3Q08E93 113 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 ARFRP1Q13795 201 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 RNASE12Q5GAN4 147 aaKnown RBP5.32□□□□□ -1.56
LIG3-206ENST00000586058 MBNL2Q5VZF2 373 aaKnown RBP5.32□□□□□ -1.56
LIG3-206ENST00000586058 STEAP3Q658P3 488 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 OR2T2Q6IF00 324 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 FAM166AQ6J272 317 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 VHLLQ6RSH7 139 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 LINC00596Q86U02 117 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 IZUMO1Q8IYV9 350 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 SAXO1Q8IYX7 474 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 OSR2Q8N2R0 312 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 PAQR4Q8N4S7 273 aaPredicted RBP5.32□□□□□ -1.56
LIG3-206ENST00000586058 ZSCAN4Q8NAM6 433 aaPredicted RBP5.32□□□□□ -1.56
LIG3-206ENST00000586058 PXT1Q8NFP0 134 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 OR8G5Q8NG78 346 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 OR13G1Q8NGZ3 307 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 OR51F2Q8NH61 342 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 KLF14Q8TD94 323 aaPredicted RBP5.32□□□□□ -1.56
LIG3-206ENST00000586058 SMIM4Q8WVI0 70 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 SLC25A38Q96DW6 304 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 RAB3CQ96E17 227 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 ZNF75AQ96N20 296 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 CNTNAP3BQ96NU0 1288 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 NEDD4LQ96PU5 975 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 GAL3ST1Q99999 423 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 THAP7Q9BT49 309 aaPredicted RBP5.32□□□□□ -1.56
LIG3-206ENST00000586058 SOX7Q9BT81 388 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 CNTNAP3Q9BZ76 1288 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 PKIBQ9C010 78 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 SELENOIQ9C0D9 397 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 TMEM100Q9NV29 134 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 IL36GQ9NZH8 169 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 JKAMPQ9P055 326 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 COPZ2Q9P299 210 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 FBLN5Q9UBX5 448 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 DUSP13Q9UII6 198 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 PURGQ9UJV8 347 aaKnown RBP5.32□□□□□ -1.56
LIG3-206ENST00000586058 RHBDD3Q9Y3P4 386 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 ATP23Q9Y6H3 246 aa5.32□□□□□ -1.56
LIG3-206ENST00000586058 SPTBN2O15020 2390 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 IGKV1-9A0A0C4DH69 117 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 LINC00854A0A1B0GVQ3 168 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 FAM240BA0A1B0GVZ2 78 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 hCG_1807616A0A1W2PRN6 198 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 PQLC2LA1A4F0 135 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 C5orf63A6NC05 138 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 TUBAL3A6NHL2 446 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 SERPINE3A8MV23 424 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 TMEM14DPA8MWL7 114 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 PRSS44E7EML9 344 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms