RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 FCER2P06734 321 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 QDPRP09417 244 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ZNF20P17024 532 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CTSSP25774 331 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 NTF4P34130 210 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CSNK1A1P48729 337 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 HIST3H3Q16695 136 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 SMUG1Q53HV7 270 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 VAX1Q5SQQ9 334 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CORO6Q6QEF8 472 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 TMEM123Q8N131 208 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ACBD4Q8NC06 268 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CHST4Q8NCG5 386 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CCDC54Q8NEL0 328 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 OR52N4Q8NGI2 321 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 THAP6Q8TBB0 222 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 SHPKQ9UHJ6 478 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 MED19A0JLT2 244 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 AQP7O14520 342 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 FAM87AP0C7U9 286 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 CX3CR1P49238 355 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 GRB2P62993 217 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 ARL6IP1Q15041 203 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PHYHD1Q5SRE7 291 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 NSUN5P2Q63ZY6 315 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 OR10K2Q6IF99 312 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 SLC25A47Q6Q0C1 308 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TFAP2EQ6VUC0 442 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 NAA40Q86UY6 237 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 ANGPTL5Q86XS5 388 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 OR10S1Q8NGN2 331 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TMEM54Q969K7 222 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 ADAT3Q96EY9 351 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PLSCR2Q9NRY7 297 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 NCOR2Q9Y618 2525 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 WIPF3A6NGB9 483 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 DBX1A6NMT0 343 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 SCO1O75880 301 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 SPDEFO95238 335 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 UQCC3Q6UW78 93 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 AAED1Q7RTV5 226 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 CD163Q86VB7 1156 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TMEM17Q86X19 198 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 HOGA1Q86XE5 327 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 INO80EQ8NBZ0 244 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TMEM185AQ8NFB2 350 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 OCSTAMPQ9BR26 566 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 NMES1Q9C002 83 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PRDM14Q9GZV8 571 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 LHFPL6Q9Y693 200 aa13.08□□□□□ -0.32
CDK5RAP3-236ENST00000584991 IGKV3D-15A0A087WSY6 115 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 CRYABP02511 175 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 RLN2P04090 185 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 ALDH3B1P43353 468 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PRKXP51817 358 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 LSM6P62312 80 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PPP1R1AQ13522 171 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TAF13Q15543 124 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PAN3Q58A45 887 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TMEM128Q5BJH2 165 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 AWAT2Q6E213 333 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 DOK3Q7L591 496 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 OR4S1Q8NGB4 309 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 OR56B1Q8NGI3 324 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TERB2Q8NHR7 220 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PPP1R1CQ8WVI7 109 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 FBXW5Q969U6 566 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 SARAFQ96BY9 339 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 URM1Q9BTM9 101 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 CST11Q9H112 138 aa13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 ZMAT3Q9HA38 289 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 FOXD3Q9UJU5 478 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TRBV6-7A0A0A0MS04 114 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 NUDT19A8MXV4 375 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 LMX1BO60663 402 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PRKACBP22694 351 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 NAAAQ02083 359 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 RTL6Q6ICC9 239 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TUSC5Q8IXB3 177 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 C20orf196Q8IYI0 205 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 MRGPRFQ96AM1 343 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 INTS12Q96CB8 462 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 SPENQ96T58 3664 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 VRK1Q99986 396 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 LPAR5Q9H1C0 372 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 SEC61A2Q9H9S3 476 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 KCNK7Q9Y2U2 307 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 NOSIPQ9Y314 301 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 RNF222A6NCQ9 220 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TEX46H3BTG2 121 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 CDAP32320 146 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 HRH1P35367 487 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PPA1Q15181 289 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 NKPD1Q17RQ9 610 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 OR13C9Q8NGT0 318 aa13.06□□□□□ -0.32
CDK5RAP3-236ENST00000584991 OR10K1Q8NGX5 313 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms