RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 VPREB3Q9UKI3 123 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 IGKV1D-17A0A075B6S4 117 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 A0A0U1RQV5 110 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 CCDC182A6NF36 153 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 ACOD1A6NK06 481 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 RIDAP52758 137 aaKnown RBP16.74■□□□□ 0.27
TOP3A-219ENST00000584887 CRISP1P54107 249 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 CAV3P56539 151 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 RIPPLY1Q0D2K3 151 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 CEACAM21Q3KPI0 293 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 NCR3LG1Q68D85 454 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 Q6ZSV7 163 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 TRPM8Q7Z2W7 1104 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 ZNRF1Q8ND25 227 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 ZNF671Q8TAW3 534 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 UBE2FQ969M7 185 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 TEAD3Q99594 435 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 METTL8Q9H825 291 aaKnown RBP16.74■□□□□ 0.27
TOP3A-219ENST00000584887 TCF7L1Q9HCS4 588 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 COPS3Q9UNS2 423 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 PIGLQ9Y2B2 252 aa16.74■□□□□ 0.27
TOP3A-219ENST00000584887 TRRAPQ9Y4A5 3859 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 OR5B21A6NL26 309 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 PRR32B1ATL7 298 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 H0YAE9 185 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 M0R129 80 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 M0R1W7 72 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 ANGPTL7O43827 346 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 PSG2P11465 335 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 ESRRGP62508 458 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 MFGE8Q08431 387 aaPredicted RBP16.73■□□□□ 0.27
TOP3A-219ENST00000584887 DEGS2Q6QHC5 323 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 ASB17Q8WXJ9 295 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 TNFRSF14Q92956 283 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 PPP1R14AQ96A00 147 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 OR8B4Q96RC9 309 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 CNN2Q99439 309 aaKnown RBP16.73■□□□□ 0.27
TOP3A-219ENST00000584887 ENPP5Q9UJA9 477 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 TMEM14AQ9Y6G1 99 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 NOTCH1P46531 2555 aa16.73■□□□□ 0.27
TOP3A-219ENST00000584887 TCRBV3S1A0A5B6 114 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 ANKRD61A6NGH8 418 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 PRKYO43930 277 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 ATP6V1B1P15313 513 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 UBE2E1P51965 193 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 PROK1P58294 105 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 PDLIM3Q53GG5 364 aaPredicted RBP16.72■□□□□ 0.27
TOP3A-219ENST00000584887 ZNF684Q5T5D7 378 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 ZNF679Q8IYX0 411 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 ZSCAN4Q8NAM6 433 aaPredicted RBP16.72■□□□□ 0.27
TOP3A-219ENST00000584887 OR5A2Q8NGI9 324 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 DNAJC9Q8WXX5 260 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 AQP3Q92482 292 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 ZNF488Q96MN9 340 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 MAB21L2Q9Y586 359 aa16.72■□□□□ 0.27
TOP3A-219ENST00000584887 LOC110117498-PIK3R3F6TDL0 507 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 ZNF254O75437 659 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 CLPXO76031 633 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 NRASP01111 189 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 ROM1Q03395 351 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 SMIM21Q3B7S5 101 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 C1orf122Q6ZSJ8 110 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 BCDIN3DQ7Z5W3 292 aaKnown RBP16.71■□□□□ 0.27
TOP3A-219ENST00000584887 APOL4Q9BPW4 351 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 RBM4BQ9BQ04 359 aaKnown RBP16.71■□□□□ 0.27
TOP3A-219ENST00000584887 PRRG3Q9BZD7 231 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 PPA2Q9H2U2 334 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 MMP27Q9H306 513 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 NUFIP1Q9UHK0 495 aaKnown RBP16.71■□□□□ 0.27
TOP3A-219ENST00000584887 ZNF222Q9UK12 451 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 POMPQ9Y244 141 aa16.71■□□□□ 0.27
TOP3A-219ENST00000584887 TRBV23-1A0A0A0MS06 115 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 RFPL4AA6NLU0 287 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 RFPL4AL1F8VTS6 287 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 MAGEB4O15481 346 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-219ENST00000584887 DHRS3O75911 302 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 DAPP51397 102 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 PTGES3Q15185 160 aaKnown RBP16.7■□□□□ 0.26
TOP3A-219ENST00000584887 BCL2L15Q5TBC7 163 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 ASPHD2Q6ICH7 369 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 FAHD1Q6P587 224 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 ZNF322Q6U7Q0 402 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-219ENST00000584887 ACP7Q6ZNF0 438 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 PLEKHG7Q6ZR37 379 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 SLC35F2Q8IXU6 374 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 BATF2Q8N1L9 274 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 OR5D13Q8NGL4 314 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 OR5R1Q8NH85 324 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 GPR173Q9NS66 373 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 C19orf12Q9NSK7 152 aa16.7■□□□□ 0.26
TOP3A-219ENST00000584887 H2AFY2Q9P0M6 372 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-219ENST00000584887 SF3B6Q9Y3B4 125 aaKnown RBP16.7■□□□□ 0.26
TOP3A-219ENST00000584887 H3BUX3 64 aa16.69■□□□□ 0.26
TOP3A-219ENST00000584887 SYNGR1O43759 233 aa16.69■□□□□ 0.26
TOP3A-219ENST00000584887 MITFO75030 526 aaPredicted RBP16.69■□□□□ 0.26
TOP3A-219ENST00000584887 MTRF1O75570 445 aaKnown RBP16.69■□□□□ 0.26
TOP3A-219ENST00000584887 DNAJC8O75937 253 aaPredicted RBP16.69■□□□□ 0.26
TOP3A-219ENST00000584887 TTRP02766 147 aa16.69■□□□□ 0.26
TOP3A-219ENST00000584887 TGFBR2P37173 567 aa16.69■□□□□ 0.26
TOP3A-219ENST00000584887 HAAOP46952 286 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms