RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	MRM2	Q9UI43	246 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OR52A1	Q9UKL2	312 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		A0A0U1RQK1	487 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		A0A1B0GVI7	797 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	FAM181B	A6NEQ2	426 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OR5B21	A6NL26	309 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		H3BSH0	61 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	IGLV3-1	P01715	115 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	KRT8	P05787	483 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	MELTF	P08582	738 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	EGR3	Q06889	387 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ODF4	Q2M2E3	257 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ZNF684	Q5T5D7	378 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		Q6YL49	198 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ZNF788	Q6ZQV5	615 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SSX6	Q7RTT6	188 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CMTM4	Q8IZR5	234 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	YIPF7	Q8N8F6	280 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	LY6G5B	Q8NDX9	201 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OR10H4	Q8NGA5	316 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OR5A2	Q8NGI9	324 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ANGPTL6	Q8NI99	470 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PYDC1	Q8WXC3	89 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	AQP3	Q92482	292 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	DCTN5	Q9BTE1	182 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ZNF747	Q9BV97	191 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	DNTTIP1	Q9H147	329 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	MOB1A	Q9H8S9	216 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	UNKL	Q9H9P5	680 aa	Known RBP	11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	NOX4	Q9NPH5	578 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SIRT7	Q9NRC8	400 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GPR173	Q9NS66	373 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	WARS2	Q9UGM6	360 aa	Known RBP	11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SNX5	Q9Y5X3	404 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	KPTN	Q9Y664	436 aa		11.23	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		A0A1W2PQ09	198 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		A0A1W2PRD5	423 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		A0A1W2PRF3	423 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		A0A1W2PRM7	423 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GPR37	O15354	613 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SRSF10	O75494	262 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CRYBA1	P05813	215 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ACAA1	P09110	424 aa	Predicted RBP	11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	HTR1F	P30939	366 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	DLX1	P56177	255 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CLVS2	Q5SYC1	327 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ZBTB37	Q5TC79	503 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	FIP1L1	Q6UN15	594 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ASRGL1	Q7L266	308 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ELMOD2	Q8IZ81	293 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	BATF2	Q8N1L9	274 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ZNRF1	Q8ND25	227 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	TMEM185A	Q8NFB2	350 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SGMS2	Q8NHU3	365 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ZNF488	Q96MN9	340 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GABARAPL3	Q9BY60	117 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CHIA	Q9BZP6	476 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PRDM13	Q9H4Q3	707 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ELL3	Q9HB65	397 aa	Predicted RBP	11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SLC22A13	Q9Y226	551 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	FAM96B	Q9Y3D0	163 aa		11.22	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	IGKV1D-17	A0A075B6S4	117 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		A0A1W2PQL4	384 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SIGLEC5	O15389	551 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PSG2	P11465	335 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	MDK	P21741	143 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	HAAO	P46952	286 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CAPZA1	P52907	286 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SHISA2	Q6UWI4	295 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	KRT74	Q7RTS7	529 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PIP4P2	Q8N4L2	257 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OR8J1	Q8NGP2	316 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ITFG2	Q969R8	447 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	RBM4B	Q9BQ04	359 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OSBPL10	Q9BXB5	764 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		V9GYS6	101 aa		11.21	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		A0A1B0GTI1	187 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	METTL15	A6NJ78	407 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SPRY1	O43609	319 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SYNGR1	O43759	233 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	IGHV4-59	P01825	116 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	OR2T7	P0C7T2	308 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	EEF1B2	P24534	225 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CDC42	P60953	191 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	KLRD1	Q13241	179 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	KPNB1	Q14974	876 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ZNF573	Q86YE8	665 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	KIR3DL3	Q8N743	410 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186		Q8N7P7	452 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	OR14K1	Q8NGZ2	314 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	OR2T27	Q8NH04	317 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	TBC1D15	Q8TC07	691 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SSMEM1	Q8WWF3	244 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RFK	Q969G6	155 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	UBE2F	Q969M7	185 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	EME1	Q96AY2	570 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ADI1	Q9BV57	179 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	PLEKHA1	Q9HB21	404 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	IMPAD1	Q9NX62	359 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms