RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ANKRD30BLA7E2S9 258 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 C22orf46C9J442 243 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 E9PI62 339 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 CLDN34H7C241 214 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 HOXA3O43365 443 aaPredicted RBP13.02□□□□□ -0.33
SKA2-209ENST00000583976 ACKR3P25106 362 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 DDOSTP39656 456 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 KIR3DL2P43630 455 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 NANOS3P60323 173 aaKnown RBP13.02□□□□□ -0.33
SKA2-209ENST00000583976 CSNK2BP67870 215 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 IL13RA1P78552 427 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 MED21Q13503 144 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 OR8G1Q15617 311 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 DEFB112Q30KQ8 113 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 ZNF404Q494X3 552 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 LYPD2Q6UXB3 125 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 BTNL3Q6UXE8 466 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 TMPRSS11AQ6ZMR5 421 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 RDH10Q8IZV5 341 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 SYS1Q8N2H4 156 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 OR2G2Q8NGZ5 317 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 SGCDQ92629 289 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 Q9H521 79 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 MRPL15Q9P015 296 aaKnown RBP13.02□□□□□ -0.33
SKA2-209ENST00000583976 FRRS1LQ9P0K9 344 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 ZNF391Q9UJN7 358 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 CAB39Q9Y376 341 aaPredicted RBP13.02□□□□□ -0.33
SKA2-209ENST00000583976 RHBDD3Q9Y3P4 386 aa13.02□□□□□ -0.33
SKA2-209ENST00000583976 A6NIN4 97 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 IGLV3-1P01715 115 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 MAP2K3P46734 347 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 PITPNBP48739 271 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 GTF2A1P52655 376 aaPredicted RBP13.01□□□□□ -0.33
SKA2-209ENST00000583976 GBX2P52951 348 aaPredicted RBP13.01□□□□□ -0.33
SKA2-209ENST00000583976 OR8B8Q15620 311 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 PDLIM3Q53GG5 364 aaPredicted RBP13.01□□□□□ -0.33
SKA2-209ENST00000583976 PRAMEF6Q5VXH4 476 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 OR8B3Q8NGG8 313 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 RAB40AQ8WXH6 277 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 GATAD2BQ8WXI9 593 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 NEIL1Q96FI4 390 aaPredicted RBP13.01□□□□□ -0.33
SKA2-209ENST00000583976 OR8B2Q96RD0 313 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 ADAT1Q9BUB4 502 aaKnown RBP13.01□□□□□ -0.33
SKA2-209ENST00000583976 PAPOLGQ9BWT3 736 aaKnown RBP13.01□□□□□ -0.33
SKA2-209ENST00000583976 RASSF4Q9H2L5 321 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 FKBP14Q9NWM8 211 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 PAK1IP1Q9NWT1 392 aaPredicted RBP13.01□□□□□ -0.33
SKA2-209ENST00000583976 TPRKBQ9Y3C4 175 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 DOCK11Q5JSL3 2073 aa13.01□□□□□ -0.33
SKA2-209ENST00000583976 NOTCH1P46531 2555 aa13□□□□□ -0.33
SKA2-209ENST00000583976 A0A1B0GTI1 187 aa13□□□□□ -0.33
SKA2-209ENST00000583976 A0A1B0GVI7 797 aa13□□□□□ -0.33
SKA2-209ENST00000583976 MTRF1O75570 445 aaKnown RBP13□□□□□ -0.33
SKA2-209ENST00000583976 CDK1P06493 297 aa13□□□□□ -0.33
SKA2-209ENST00000583976 GNALP38405 381 aa13□□□□□ -0.33
SKA2-209ENST00000583976 SRP9P49458 86 aaKnown RBP13□□□□□ -0.33
SKA2-209ENST00000583976 FGF12P61328 243 aa13□□□□□ -0.33
SKA2-209ENST00000583976 ALKBH1Q13686 389 aaKnown RBP13□□□□□ -0.33
SKA2-209ENST00000583976 MIDNQ504T8 468 aa13□□□□□ -0.33
SKA2-209ENST00000583976 DMRTC1Q5HYR2 192 aa13□□□□□ -0.33
SKA2-209ENST00000583976 CSNK2A3Q8NEV1 391 aa13□□□□□ -0.33
SKA2-209ENST00000583976 WFDC12Q8WWY7 111 aa13□□□□□ -0.33
SKA2-209ENST00000583976 PIGCQ92535 297 aa13□□□□□ -0.33
SKA2-209ENST00000583976 MYDGFQ969H8 173 aa13□□□□□ -0.33
SKA2-209ENST00000583976 TMIGD2Q96BF3 282 aa13□□□□□ -0.33
SKA2-209ENST00000583976 NUDT16L1Q9BRJ7 211 aaKnown RBP13□□□□□ -0.33
SKA2-209ENST00000583976 SLC22A4Q9H015 551 aa13□□□□□ -0.33
SKA2-209ENST00000583976 ERVK-18Q9QC07 812 aa13□□□□□ -0.33
SKA2-209ENST00000583976 CTSZQ9UBR2 303 aa13□□□□□ -0.33
SKA2-209ENST00000583976 PIGLQ9Y2B2 252 aa13□□□□□ -0.33
SKA2-209ENST00000583976 ZNF850A8MQ14 1090 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 MYL12BO14950 172 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 SYT7O43581 403 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 DENRO43583 198 aaKnown RBP12.99□□□□□ -0.33
SKA2-209ENST00000583976 GMDSO60547 372 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 DHRS3O75911 302 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 SFTPBP07988 381 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 CCDC159P0C7I6 412 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 PPIAL4GP0DN37 164 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 FAHP16930 419 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 RELBQ01201 579 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 RIPPLY1Q0D2K3 151 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 PRDX4Q13162 271 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 MAB21L1Q13394 359 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 XAF1Q6GPH4 301 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 FDX2Q6P4F2 183 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 FTMTQ8N4E7 242 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 OR14K1Q8NGZ2 314 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 OR8S1Q8NH09 359 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 CCDC90BQ9GZT6 254 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 UFSP2Q9NUQ7 469 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 BABAM2Q9NXR7 383 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 CLN8Q9UBY8 286 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 MIOXQ9UGB7 285 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 WNK1Q9H4A3 2382 aa12.99□□□□□ -0.33
SKA2-209ENST00000583976 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.98□□□□□ -0.33
SKA2-209ENST00000583976 TRBV2A0A0J9YWF9 115 aa12.98□□□□□ -0.33
SKA2-209ENST00000583976 ZNF816-ZNF321PA0A0X1KG74 233 aa12.98□□□□□ -0.33
SKA2-209ENST00000583976 LOC107986453A0A1B0GWG9 222 aa12.98□□□□□ -0.33
SKA2-209ENST00000583976 A0A1B0GWJ7 208 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms