RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	MAP2K3	P46734	347 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	CEBPD	P49716	269 aa	Predicted RBP	12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	EFNB2	P52799	333 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	GNG3	P63215	75 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	LRRC75B	Q2VPJ9	315 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	FAM76B	Q5HYJ3	339 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	PLCXD3	Q63HM9	321 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	HAGHL	Q6PII5	290 aa	Predicted RBP	12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	CD300LD	Q6UXZ3	194 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	THAP5	Q7Z6K1	395 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	TMEM179B	Q7Z7N9	219 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	CPO	Q8IVL8	374 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	LYG1	Q8N1E2	194 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	KLHDC1	Q8N7A1	406 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	OR5D13	Q8NGL4	314 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	CCDC124	Q96CT7	223 aa	Known RBP	12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	CLPTM1L	Q96KA5	538 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	LRGUK	Q96M69	825 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	NKX3-1	Q99801	234 aa	Predicted RBP	12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	OR51I2	Q9H344	312 aa		12.33	□□□□□ -0.44
SREBF1-222	ENST00000583732	TRBV23-1	A0A0A0MS06	115 aa		12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	GNGT2	O14610	69 aa		12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	PRODH	O43272	600 aa		12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	VSIG10L2	P0DP72	767 aa		12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	RAP2A	P10114	183 aa		12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	BMX	P51813	675 aa		12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	TRIM25	Q14258	630 aa	Known RBP	12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	PLA1A	Q53H76	456 aa		12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	ZNF671	Q8TAW3	534 aa		12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	FAM234A	Q9H0X4	552 aa		12.32	□□□□□ -0.44
SREBF1-222	ENST00000583732	TMEM269	A0A1B0GVZ9	245 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	CCL3L1	P16619	93 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	FAH	P16930	419 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	MNAT1	P51948	309 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	ERVFRD-1	P60508	538 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	APOF	Q13790	326 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	BEAN1	Q3B7T3	259 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	CEACAM21	Q3KPI0	293 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	TMEM236	Q5W0B7	351 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	ACP7	Q6ZNF0	438 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	TRPM8	Q7Z2W7	1104 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	PIGW	Q7Z7B1	504 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	HS3ST5	Q8IZT8	346 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	OR4M1	Q8NGD0	313 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	OR2T6	Q8NHC8	308 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	OR51E1	Q8TCB6	317 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	AQP3	Q92482	292 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	SDSL	Q96GA7	329 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	AJUBA	Q96IF1	538 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	NSL1	Q96IY1	281 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	CHID1	Q9BWS9	393 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	GPR84	Q9NQS5	396 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	FAM206A	Q9NX38	181 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	GTF2A1L	Q9UNN4	478 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	PIGL	Q9Y2B2	252 aa		12.31	□□□□□ -0.44
SREBF1-222	ENST00000583732	OR5B21	A6NL26	309 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	RFPL4A	A6NLU0	287 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	RFPL4AL1	F8VTS6	287 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	SYNGR1	O43759	233 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	CHST1	O43916	411 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	E2F6	O75461	281 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	HMGN1	P05114	100 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	OSM	P13725	252 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	ALOX5AP	P20292	161 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	KIR2DS4	P43632	304 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	RIPPLY1	Q0D2K3	151 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	SLC35D3	Q5M8T2	416 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	ZNF782	Q6ZMW2	699 aa	Predicted RBP	12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	ADGRG5	Q8IZF4	528 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	ARHGAP24	Q8N264	748 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	CD177	Q8N6Q3	437 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	PPP1R14A	Q96A00	147 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	PBOV1	Q9GZY1	135 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	ZNF556	Q9HAH1	456 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	GPR173	Q9NS66	373 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	OR14J1	Q9UGF5	321 aa		12.3	□□□□□ -0.44
SREBF1-222	ENST00000583732	PLXNB1	O43157	2135 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732		A0A0U1RQV5	110 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	ARRDC5	A6NEK1	342 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	PRR32	B1ATL7	298 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	SLC1A7	O00341	560 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	GSC2	O15499	205 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	MTRF1	O75570	445 aa	Known RBP	12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	OPN1MW	P04001	364 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	OPN1MW2	P0DN77	364 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	OPN1MW3	P0DN78	364 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	PIP	P12273	146 aa	Predicted RBP	12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	SLC2A5	P22732	501 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	LGALS4	P56470	323 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	RPL31	P62899	125 aa	Known RBP	12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	CDK5	Q00535	292 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	MFGE8	Q08431	387 aa	Predicted RBP	12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	GK3P	Q14409	553 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	HABP2	Q14520	560 aa	Predicted RBP	12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	ZNF273	Q14593	569 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	FAM189A2	Q15884	450 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	SMIM21	Q3B7S5	101 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	NSUN5P1	Q3KNT7	163 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	TMEM200B	Q69YZ2	307 aa		12.29	□□□□□ -0.44
SREBF1-222	ENST00000583732	KCTD18	Q6PI47	426 aa	Predicted RBP	12.29	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms