RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ZFAND6Q6FIF0 208 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 ULK3Q6PHR2 472 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 ANGPTL8Q6UXH0 198 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 NT5DC3Q86UY8 548 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 BBS7Q8IWZ6 715 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 LINC00469Q8N7U9 141 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 FAM184AQ8NB25 1140 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 OR51L1Q8NGJ5 315 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 TCP10LQ8TDR4 215 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 ZCCHC13Q8WW36 166 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 S100PBPQ96BU1 408 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 RCN3Q96D15 328 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 ALS2CR12Q96Q35 445 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 GABRG3Q99928 467 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 PLA2G12AQ9BZM1 189 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 ZC4H2Q9NQZ6 224 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 TREX1Q9NSU2 369 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 TAS2R1Q9NYW7 299 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 HMGXB4Q9UGU5 601 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 KPTNQ9Y664 436 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 SHANK1Q9Y566 2161 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 C4orf51C9J302 202 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2□□□□□ -2.09
SMCHD1-204ENST00000581226 CCDC22O60826 627 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 LCA5LO95447 670 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 INAFM2P0DMQ5 153 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 ZNF35P13682 527 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 HRES1P13985 223 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 CSKP41240 450 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 TGM4P49221 684 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 ATP5J2P56134 94 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 PAFAH1B2P68402 229 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 STEAP4Q687X5 459 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 HCP5Q6MZN7 132 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 FAM131AQ6UXB0 335 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 USP50Q70EL3 339 aaPredicted RBP2□□□□□ -2.09
SMCHD1-204ENST00000581226 SLC35D2Q76EJ3 337 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 OR2W3Q7Z3T1 314 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 VTCN1Q7Z7D3 282 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 WDR31Q8NA23 367 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 FBXO36Q8NEA4 188 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 SFXN5Q8TD22 340 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 RXFP2Q8WXD0 754 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 SNF8Q96H20 258 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 ZBED3Q96IU2 234 aaPredicted RBP2□□□□□ -2.09
SMCHD1-204ENST00000581226 RDH12Q96NR8 316 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 OR51B5Q9H339 312 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 FANCEQ9HB96 536 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 HEBP1Q9NRV9 189 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 VAX2Q9UIW0 290 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 RAB22AQ9UL26 194 aa2□□□□□ -2.09
SMCHD1-204ENST00000581226 ZNF608Q9ULD9 1512 aaPredicted RBP2□□□□□ -2.09
SMCHD1-204ENST00000581226 THADAQ6YHU6 1953 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 LOC102724200A0A096LPH7 203 aaPredicted RBP1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 IGKV1-6A0A0C4DH72 117 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 GOLGA8JA6NMD2 632 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 H0YC42 278 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 IGKV1-39P01597 117 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 IGKV1D-39P04432 117 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 GOLGA8HP0CJ92 632 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 GFAPP14136 432 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 CXCR1P25024 350 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 IVDP26440 423 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 PSMD4P55036 377 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 XIAPP98170 497 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 RPL18AQ02543 176 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 INCA1Q0VD86 236 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 EPGNQ6UW88 154 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 SLC30A8Q8IWU4 369 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 OR5T3Q8NGG3 340 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 OR52K1Q8NGK4 314 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 OR1S1Q8NH92 325 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 ZNF75CPQ92670 426 aaPredicted RBP1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 SMARCD1Q96GM5 515 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 CLSTN2Q9H4D0 955 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 KIR3DX1Q9H7L2 352 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 CHRAC1Q9NRG0 131 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 ZNF492Q9P255 531 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 CES1P1Q9UKY3 287 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 KLF12Q9Y4X4 402 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 SEC16AO15027 2179 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 ADAMTSL3P82987 1691 aa1.99□□□□□ -2.09
SMCHD1-204ENST00000581226 ZSWIM8A7E2V4 1837 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 MROH5Q6ZUA9 1318 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 HACD1B0YJ81 288 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 MYL12BO14950 172 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 HSBP1O75506 76 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 FSTL3O95633 263 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 PTTG1O95997 202 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 NRASP01111 189 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 HRASP01112 189 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 KRASP01116 189 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 IL3RAP26951 378 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 PRSS3P35030 304 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 ERFP50548 548 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 CARD18P57730 90 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 ZNF678Q5SXM1 525 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 HHATQ5VTY9 493 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms