RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 ESCO2Q56NI9 601 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 TMEM244Q5VVB8 128 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 RNLSQ5VYX0 342 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 RPL22L1Q6P5R6 122 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 PRSS48Q7RTY5 328 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 ITFG2Q969R8 447 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 LYZL4Q96KX0 146 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 OR2V2Q96R30 315 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 SLC22A4Q9H015 551 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 FRRS1LQ9P0K9 344 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 LRCH1Q9Y2L9 728 aa12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 NOP16Q9Y3C1 178 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-207ENST00000572346 TMEM178BH3BS89 294 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 DHRS3O75911 302 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 CA6P23280 308 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 MDH2P40926 338 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 TAS2R43P59537 309 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 NANOS3P60323 173 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 PAX8Q06710 450 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 OR8G1Q15617 311 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 OR8B8Q15620 311 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 CCDC58Q4VC31 144 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 RDH10Q8IZV5 341 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 CCDC54Q8NEL0 328 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 OR5AK2Q8NH90 309 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 PIGCQ92535 297 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 SLC30A2Q9BRI3 323 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 PAPOLGQ9BWT3 736 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 UNKLQ9H9P5 680 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 PLEKHA1Q9HB21 404 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 MRPL15Q9P015 296 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 OR5V1Q9UGF6 321 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 PIGLQ9Y2B2 252 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 DOCK11Q5JSL3 2073 aa12.37□□□□□ -0.43
NPLOC4-207ENST00000572346 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 A0A1B0GTI1 187 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 LOC107986453A0A1B0GWG9 222 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 TMEM212A6NML5 194 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 OR4C45A6NMZ5 311 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 CEACAM18A8MTB9 384 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 MRPS14O60783 128 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 IGLV3-1P01715 115 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 HLA-DPB1P04440 258 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 RNASE1P07998 156 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 RPSAP08865 295 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 WNT2P09544 360 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 CD80P33681 288 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 IRF3Q14653 427 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 CDK5R1Q15078 307 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 SPHARQ15513 63 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 MUC20Q8N307 709 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 SVOPQ8N4V2 548 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 ZFP41Q8N8Y5 198 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 OR8S1Q8NH09 359 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 RNF166Q96A37 237 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 MS4A7Q9GZW8 240 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 GCM1Q9NP62 436 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 ENPP5Q9UJA9 477 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 HHLA2Q9UM44 414 aa12.36□□□□□ -0.43
NPLOC4-207ENST00000572346 ZNF816-ZNF321PA0A0X1KG74 233 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 PNMA8CA0A1B0GUJ8 204 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 ANXA2P2A6NMY6 339 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 CLDN34H7C241 214 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 GMDSO60547 372 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 LALBAP00709 142 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 HSMCR30P0CW71 290 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 IGHV4-38-2P0DP08 117 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 CCL1P22362 96 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 ACKR3P25106 362 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 SRP9P49458 86 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 IL13RA1P78552 427 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 PAX2Q02962 417 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 MZT1Q08AG7 82 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 SLC9A3R2Q15599 337 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 XAF1Q6GPH4 301 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 SPERTQ8NA61 448 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 OR10AD1Q8NGE0 317 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 ZNF420Q8TAQ5 688 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 TSEN15Q8WW01 171 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 TAF15Q92804 592 aaKnown RBP eCLIP12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 SLC25A28Q96A46 364 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 HIST1H2AAQ96QV6 131 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 PDCD1LG2Q9BQ51 273 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 ADAT1Q9BUB4 502 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 SSBP3Q9BWW4 388 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 MPC1Q9Y5U8 109 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 SOX21Q9Y651 276 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 TRRAPQ9Y4A5 3859 aa12.35□□□□□ -0.43
NPLOC4-207ENST00000572346 IGHV3OR16-10A0A075B7F0 116 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 ZNF850A8MQ14 1090 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 F5H5P2 479 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 H0YL77 283 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 IFNL4K9M1U5 179 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 OGG1O15527 345 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 MLNRO43193 412 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 ZFPL1O95159 310 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 ZNF205O95201 554 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 TNFAIP8O95379 198 aa12.34□□□□□ -0.43
NPLOC4-207ENST00000572346 ISG15P05161 165 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms