RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 LRRC29Q8WV35 223 aa7.2□□□□□ -1.26
SMG6-210ENST00000572205 NEIL1Q96FI4 390 aaPredicted RBP7.2□□□□□ -1.26
SMG6-210ENST00000572205 RCC1LQ96I51 464 aaKnown RBP7.2□□□□□ -1.26
SMG6-210ENST00000572205 FAM71F1Q96KD3 344 aaPredicted RBP7.2□□□□□ -1.26
SMG6-210ENST00000572205 C1orf147Q96MC9 270 aaPredicted RBP7.2□□□□□ -1.26
SMG6-210ENST00000572205 SSBP3Q9BWW4 388 aaPredicted RBP7.2□□□□□ -1.26
SMG6-210ENST00000572205 BEX2Q9BXY8 128 aa7.2□□□□□ -1.26
SMG6-210ENST00000572205 SP140LQ9H930 580 aa7.2□□□□□ -1.26
SMG6-210ENST00000572205 ISG20L2Q9H9L3 353 aaKnown RBP7.2□□□□□ -1.26
SMG6-210ENST00000572205 FN3KRPQ9HA64 309 aa7.2□□□□□ -1.26
SMG6-210ENST00000572205 RNPEPL1Q9HAU8 725 aa7.2□□□□□ -1.26
SMG6-210ENST00000572205 HES4Q9HCC6 221 aa7.2□□□□□ -1.26
SMG6-210ENST00000572205 ESM1Q9NQ30 184 aa7.2□□□□□ -1.26
SMG6-210ENST00000572205 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMG6-210ENST00000572205 NOP16Q9Y3C1 178 aaKnown RBP7.2□□□□□ -1.26
SMG6-210ENST00000572205 GMPPBQ9Y5P6 360 aa7.2□□□□□ -1.26
SMG6-210ENST00000572205 IGKV1D-17A0A075B6S4 117 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 IGKV1-9A0A0C4DH69 117 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 A0A0G2JMP0 313 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 A0A0X1KG70 313 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 CDIPTO14735 213 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 FOXH1O75593 365 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 LALBAP00709 142 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 PLATP00750 562 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 GRPP07492 148 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 RPS2P15880 293 aaKnown RBP7.19□□□□□ -1.26
SMG6-210ENST00000572205 CPT2P23786 658 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 PITPNBP48739 271 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 GPM6AP51674 278 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 ERVK11-1P61568 191 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 IL5RAQ01344 420 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 GABPB1Q06547 395 aaPredicted RBP7.19□□□□□ -1.26
SMG6-210ENST00000572205 UBE2V2Q15819 145 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 BCL2L15Q5TBC7 163 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 ATPAF1Q5TC12 328 aaPredicted RBP7.19□□□□□ -1.26
SMG6-210ENST00000572205 SFRP4Q6FHJ7 346 aaPredicted RBP7.19□□□□□ -1.26
SMG6-210ENST00000572205 CALHM1Q8IU99 346 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.19□□□□□ -1.26
SMG6-210ENST00000572205 C1orf87Q8N0U7 546 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 KLHL36Q8N4N3 616 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 FAM216BQ8N7L0 139 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 OR4M2Q8NGB6 313 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 OR52I1Q8NGK6 324 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 OR10Z1Q8NGY1 313 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 ANGPTL6Q8NI99 470 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 CNIH3Q8TBE1 160 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 AQP3Q92482 292 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 RFKQ969G6 155 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 ITFG2Q969R8 447 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 UPRTQ96BW1 309 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 ADAT3Q96EY9 351 aaPredicted RBP7.19□□□□□ -1.26
SMG6-210ENST00000572205 ZNF48Q96MX3 618 aaPredicted RBP7.19□□□□□ -1.26
SMG6-210ENST00000572205 GAFA1Q96PS6 74 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 CHST5Q9GZS9 411 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 AMBNQ9NP70 447 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 FGF20Q9NP95 211 aaPredicted RBP7.19□□□□□ -1.26
SMG6-210ENST00000572205 IMPAD1Q9NX62 359 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 ERVK13-1Q9NX77 482 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 PIGLQ9Y2B2 252 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 SNX5Q9Y5X3 404 aa7.19□□□□□ -1.26
SMG6-210ENST00000572205 SOX21Q9Y651 276 aaPredicted RBP7.19□□□□□ -1.26
SMG6-210ENST00000572205 A6NIN4 97 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 LRRC30A6NM36 301 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 F8VVB4 439 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 F8VWA3 439 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 SYNGR1O43759 233 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 RPP14O95059 124 aaKnown RBP7.18□□□□□ -1.26
SMG6-210ENST00000572205 VENTXO95231 258 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 GYPAP02724 150 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 ISG15P05161 165 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 KRT8P05787 483 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 PGA5P0DJD9 388 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 PPIAL4GP0DN37 164 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 IGHV4-38-2P0DP08 117 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 GATA3P23771 443 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 TGM4P49221 684 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 ACTC1P68032 377 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 ACTA1P68133 377 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 RAB40BQ12829 278 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 GALEQ14376 348 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 DGUOKQ16854 277 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 LRRC36Q1X8D7 754 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 DCAF12L2Q5VW00 463 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 ZNF788Q6ZQV5 615 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 C9orf139Q6ZV77 190 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 DOK3Q7L591 496 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 PEG10Q86TG7 708 aaKnown RBP7.18□□□□□ -1.26
SMG6-210ENST00000572205 RDH10Q8IZV5 341 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 SYS1Q8N2H4 156 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 ACBD7Q8N6N7 88 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 YIPF7Q8N8F6 280 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 LY6G5BQ8NDX9 201 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 OR11L1Q8NGX0 322 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 OR8S1Q8NH09 359 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 PIGCQ92535 297 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 C12orf43Q96C57 262 aaKnown RBP7.18□□□□□ -1.26
SMG6-210ENST00000572205 C4orf36Q96KX1 117 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 ZNF488Q96MN9 340 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 TBX15Q96SF7 602 aa7.18□□□□□ -1.26
SMG6-210ENST00000572205 NRIP2Q9BQI9 281 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms