RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 TFAP2EQ6VUC0 442 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 FAM214BQ7L5A3 538 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 C1QL2Q7Z5L3 287 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 TRAPPC6BQ86SZ2 158 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 NOXA1Q86UR1 476 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 LIX1LQ8IVB5 337 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 CCDC36Q8IYA8 594 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 OR4D10Q8NGI6 311 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 ZNF486Q96H40 463 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-208ENST00000571043 REPIN1Q9BWE0 567 aaKnown RBP14.97□□□□□ -0.01
RPAIN-208ENST00000571043 BEX2Q9BXY8 128 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 BANF2Q9H503 90 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 OPA3Q9H6K4 179 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.97□□□□□ -0.01
RPAIN-208ENST00000571043 KCNN3Q9UGI6 736 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 POU2F3Q9UKI9 436 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 ELF5Q9UKW6 265 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-208ENST00000571043 FAM215AQ9Y5M1 114 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 NCOA6Q14686 2063 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-208ENST00000571043 HIVEP3Q5T1R4 2406 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 A0A1W2PP11 408 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 CNOT4O95628 575 aaKnown RBP14.97□□□□□ -0.01
RPAIN-208ENST00000571043 PRB1P04280 392 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 MGMTP16455 207 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 GNB3P16520 340 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 RBP2P50120 134 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 FUT6P51993 359 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 NKX2-5P52952 324 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-208ENST00000571043 MALLQ13021 153 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 MEF2DQ14814 521 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 ARL6IP1Q15041 203 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 C1orf185Q5T7R7 199 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 ASCL4Q6XD76 172 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 GLDNQ6ZMI3 551 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-208ENST00000571043 SEM1Q6ZVN7 128 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 ZNF843Q8N446 348 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 OR51S1Q8NGJ8 323 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 OR5D18Q8NGL1 313 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 OR8S1Q8NH09 359 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 BORCS8Q96FH0 119 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 GINS4Q9BRT9 223 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 ANAPC10Q9UM13 185 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 SLC7A11Q9UPY5 501 aa14.97□□□□□ -0.01
RPAIN-208ENST00000571043 DIDO1Q9BTC0 2240 aaKnown RBP14.96□□□□□ -0.01
RPAIN-208ENST00000571043 MBD3L4A6NDZ8 208 aaPredicted RBP14.96□□□□□ -0.02
RPAIN-208ENST00000571043 MBD3L3A6NE82 208 aaPredicted RBP14.96□□□□□ -0.02
RPAIN-208ENST00000571043 MBD3L5A6NJ08 208 aaPredicted RBP14.96□□□□□ -0.02
RPAIN-208ENST00000571043 FOXI3A8MTJ6 420 aaPredicted RBP14.96□□□□□ -0.02
RPAIN-208ENST00000571043 SOCS1O15524 211 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 TBPP20226 339 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 MPZP25189 248 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 TMEM50BP56557 158 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 GNG2P59768 71 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 TGFBR3Q03167 851 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 PLAC9Q5JTB6 97 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 OR2A2Q6IF42 318 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 OR51T1Q8NGJ9 327 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 MBD3L2Q8NHZ7 208 aaPredicted RBP14.96□□□□□ -0.02
RPAIN-208ENST00000571043 DVL3Q92997 716 aaPredicted RBP14.96□□□□□ -0.02
RPAIN-208ENST00000571043 SLC25A21Q9BQT8 299 aaPredicted RBP14.96□□□□□ -0.02
RPAIN-208ENST00000571043 METTL9Q9H1A3 318 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 GPN1Q9HCN4 374 aaPredicted RBP14.96□□□□□ -0.02
RPAIN-208ENST00000571043 TINAGQ9UJW2 476 aa14.96□□□□□ -0.02
RPAIN-208ENST00000571043 FAM230AA0A1W2PPH8 454 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 SNRPGP15A8MWD9 76 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 MFNGO00587 321 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 ZNF780AO75290 641 aaPredicted RBP14.95□□□□□ -0.02
RPAIN-208ENST00000571043 C1QL1O75973 258 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 C1QBP02746 253 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 SULT1A3P0DMM9 295 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 SULT1A4P0DMN0 295 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 TMEM225BP0DP42 221 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 CPT2P23786 658 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 APLNRP35414 380 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 TIMP3P35625 211 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 CBX5P45973 191 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 ATP1B3P54709 279 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 TLE1Q04724 770 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 ZMYND11Q15326 602 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 HIKESHIQ53FT3 197 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 DMRTC1Q5HYR2 192 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 C9orf106Q8NAJ2 232 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 DACT3Q96B18 629 aaPredicted RBP14.95□□□□□ -0.02
RPAIN-208ENST00000571043 IFT46Q9NQC8 304 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 SCP2D1Q9UJQ7 156 aa14.95□□□□□ -0.02
RPAIN-208ENST00000571043 DISC1C4P0D8 188 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 PYCARD-AS1I3L0S3 204 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 SSNA1O43805 119 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 SSX5O60225 188 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 CA11O75493 328 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 HPXP02790 462 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 ZNF735P0CB33 412 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 HOXB1P14653 301 aaPredicted RBP14.94□□□□□ -0.02
RPAIN-208ENST00000571043 NAT1P18440 290 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 SERPINA2P20848 420 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 CCNOP22674 350 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 ERP29P30040 261 aaKnown RBP14.94□□□□□ -0.02
RPAIN-208ENST00000571043 RAD52P43351 418 aa14.94□□□□□ -0.02
RPAIN-208ENST00000571043 GK2Q14410 553 aaPredicted RBP14.94□□□□□ -0.02
RPAIN-208ENST00000571043 C3P1Q6ZMU1 363 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms