RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 GPR173Q9NS66 373 aa10.87□□□□□ -0.67
CLK3-224ENST00000568605 FRRS1LQ9P0K9 344 aa10.87□□□□□ -0.67
CLK3-224ENST00000568605 ERVK-18Q9QC07 812 aa10.87□□□□□ -0.67
CLK3-224ENST00000568605 DNAJB11Q9UBS4 358 aa10.87□□□□□ -0.67
CLK3-224ENST00000568605 POLR3KQ9Y2Y1 108 aaPredicted RBP10.87□□□□□ -0.67
CLK3-224ENST00000568605 H3BSH0 61 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 J3QT63 122 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 MYL12BO14950 172 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 ADAM20O43506 726 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 LHBP01229 141 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 WNT2P09544 360 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 LIMS3P0CW19 117 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 LIMS4P0CW20 117 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 GLRA1P23415 457 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 NANOS3P60323 173 aaKnown RBP10.86□□□□□ -0.67
CLK3-224ENST00000568605 RIPK1Q13546 671 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 SMIM21Q3B7S5 101 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 CCDC58Q4VC31 144 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 FAHD2BQ6P2I3 314 aaPredicted RBP10.86□□□□□ -0.67
CLK3-224ENST00000568605 HAGHLQ6PII5 290 aaPredicted RBP10.86□□□□□ -0.67
CLK3-224ENST00000568605 BTNL3Q6UXE8 466 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 C11orf53Q8IXP5 236 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 STX19Q8N4C7 294 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 C19orf18Q8NEA5 215 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 OR13C3Q8NGS6 347 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 OR5AK2Q8NH90 309 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 TSEN15Q8WW01 171 aaKnown RBP10.86□□□□□ -0.67
CLK3-224ENST00000568605 BORCS8Q96FH0 119 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 FAHD2AQ96GK7 314 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 MRI1Q9BV20 369 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 OR51I2Q9H344 312 aa10.86□□□□□ -0.67
CLK3-224ENST00000568605 ZFHX3Q15911 3703 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 TRBV2A0A0J9YWF9 115 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 OR4C45A6NMZ5 311 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 TMPRSS2O15393 492 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 ATP6V1G2O95670 118 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 EGR1P18146 543 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 RBMXP38159 391 aaKnown RBP10.85□□□□□ -0.67
CLK3-224ENST00000568605 HAAOP46952 286 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 SEC61A1P61619 476 aaKnown RBP10.85□□□□□ -0.67
CLK3-224ENST00000568605 ST3GAL4Q11206 333 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 CD276Q5ZPR3 534 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 RPL22L1Q6P5R6 122 aaKnown RBP10.85□□□□□ -0.67
CLK3-224ENST00000568605 IZUMO2Q6UXV1 221 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 IL17RELQ6ZVW7 336 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 AHSA2Q719I0 299 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 FAM90A1Q86YD7 464 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 OR52N1Q8NH53 320 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 TRMT10AQ8TBZ6 339 aaKnown RBP10.85□□□□□ -0.67
CLK3-224ENST00000568605 FBLIM1Q8WUP2 373 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 NRG4Q8WWG1 115 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 TMIGD2Q96BF3 282 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 PKIBQ9C010 78 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 DNTTIP1Q9H147 329 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 METTL17Q9H7H0 456 aaPredicted RBP10.85□□□□□ -0.67
CLK3-224ENST00000568605 ISG20L2Q9H9L3 353 aaKnown RBP10.85□□□□□ -0.67
CLK3-224ENST00000568605 PLCXD1Q9NUJ7 323 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 SCN3BQ9NY72 215 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 JMJD1CQ15652 2540 aa10.85□□□□□ -0.67
CLK3-224ENST00000568605 IGHV3OR15-7A0A075B7D8 119 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 FAM230AA0A1W2PPH8 454 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 PQLC2LA1A4F0 135 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 A6NIN4 97 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 KIAA1324LA8MWY0 1029 aaPredicted RBP10.84□□□□□ -0.67
CLK3-224ENST00000568605 PHF1O43189 567 aaPredicted RBP10.84□□□□□ -0.67
CLK3-224ENST00000568605 AKR7A2O43488 359 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 ENSAO43768 121 aaKnown RBP10.84□□□□□ -0.67
CLK3-224ENST00000568605 CYB5AP00167 134 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 GYPAP02724 150 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 CD2P06729 351 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 PRKACBP22694 351 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 RBP2P50120 134 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 ETV1P50549 477 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 FUT6P51993 359 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 TAS2R43P59537 309 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 CDK5R1Q15078 307 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 C11orf91Q3C1V1 193 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 KRTAP21-3Q3LHN1 58 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 WDR25Q64LD2 544 aaPredicted RBP10.84□□□□□ -0.67
CLK3-224ENST00000568605 UTS2BQ765I0 119 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 DNAAF1Q8NEP3 725 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 BPIFB6Q8NFQ5 453 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 NPRL2Q8WTW4 380 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 AQP3Q92482 292 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 RNF166Q96A37 237 aaPredicted RBP10.84□□□□□ -0.67
CLK3-224ENST00000568605 SPSB1Q96BD6 273 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 CPNE2Q96FN4 548 aaPredicted RBP10.84□□□□□ -0.67
CLK3-224ENST00000568605 ZNF649Q9BS31 505 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 FGF23Q9GZV9 251 aaPredicted RBP10.84□□□□□ -0.67
CLK3-224ENST00000568605 C7orf69Q9H7B7 122 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 RASL12Q9NYN1 266 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 KAAG1Q9UBP8 84 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 PSORS1C1Q9UIG5 152 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 DHDHQ9UQ10 334 aa10.84□□□□□ -0.67
CLK3-224ENST00000568605 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.83□□□□□ -0.68
CLK3-224ENST00000568605 GPR37O15354 613 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 XPNPEP2O43895 674 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 ZFPL1O95159 310 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 ECDO95905 644 aaPredicted RBP10.83□□□□□ -0.68
CLK3-224ENST00000568605 MPZP25189 248 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms