RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 A0A0A6YYD4 124 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 PQLC2LA1A4F0 135 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 TMEM235A6NFC5 223 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 CSTBP04080 98 aaKnown RBP16.82■□□□□ 0.28
CLN6-205ENST00000564846 GSTP1P09211 210 aaKnown RBP16.82■□□□□ 0.28
CLN6-205ENST00000564846 ZNF35P13682 527 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 BMP5P22003 454 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 CPT2P23786 658 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 PDZK1IP1Q13113 114 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 ZSCAN4Q8NAM6 433 aaPredicted RBP16.82■□□□□ 0.28
CLN6-205ENST00000564846 OR10K1Q8NGX5 313 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 UPRTQ96BW1 309 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 RAB3CQ96E17 227 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 RNF170Q96K19 258 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 CACNG6Q9BXT2 260 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 IL36GQ9NZH8 169 aa16.82■□□□□ 0.28
CLN6-205ENST00000564846 ZNF107Q9UII5 783 aaPredicted RBP16.82■□□□□ 0.28
CLN6-205ENST00000564846 CECR9P0C854 216 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 RAC2P15153 192 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 GIFP27352 417 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 RAD52P43351 418 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 SPATA46Q5T0L3 261 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 MRGPRGQ86SM5 289 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 ZNF554Q86TJ5 538 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 OR5A2Q8NGI9 324 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 OR1J1Q8NGS3 322 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 HPSE2Q8WWQ2 592 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 S100PBPQ96BU1 408 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 NEURL2Q9BR09 285 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 OR2J1Q9GZK6 312 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 PCDHB16Q9NRJ7 776 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 NPAP1Q9NZP6 1156 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 NUBP2Q9Y5Y2 271 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 PIEZO2Q9H5I5 2752 aa16.81■□□□□ 0.28
CLN6-205ENST00000564846 IGHV1-18A0A0C4DH31 117 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 SOCS1O15524 211 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 SPRY1O43609 319 aaPredicted RBP16.8■□□□□ 0.28
CLN6-205ENST00000564846 ANGPTL7O43827 346 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 GTF2F2P13984 249 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 HIST1H1DP16402 221 aaKnown RBP16.8■□□□□ 0.28
CLN6-205ENST00000564846 GNB3P16520 340 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 SELEP16581 610 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 ARL6IP1Q15041 203 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 AGAP6Q5VW22 663 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 OR2T2Q6IF00 324 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 C1orf174Q8IYL3 243 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 CHAC2Q8WUX2 184 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 MRPS24Q96EL2 167 aaKnown RBP16.8■□□□□ 0.28
CLN6-205ENST00000564846 PRORYQ9H606 182 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 CRIM1Q9NZV1 1036 aa16.8■□□□□ 0.28
CLN6-205ENST00000564846 EEF1E1-BLOC1S5C9J1V9 151 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 INMT-MINDY4F8WBC2 141 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 PLATP00750 562 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 TCRBP04435 133 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 C3orf36Q3SXR2 165 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 PLAC9Q5JTB6 97 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 BHLHE23Q8NDY6 225 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 SLC25A40Q8TBP6 338 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 OR5P3Q8WZ94 311 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 MUCL1Q96DR8 90 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 CCDC120Q96HB5 630 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 BCL2L14Q9BZR8 327 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 ELF5Q9UKW6 265 aaPredicted RBP16.79■□□□□ 0.28
CLN6-205ENST00000564846 MEIS3P1A6NDR6 274 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 OR5B21A6NL26 309 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 FOXI3A8MTJ6 420 aaPredicted RBP16.79■□□□□ 0.28
CLN6-205ENST00000564846 HTR3BO95264 441 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 AKAIN1P0CW23 69 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 SFTPCP11686 197 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 TMEM50BP56557 158 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 TAS2R19P59542 299 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 BTG1P62324 171 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 PNLIPRP3Q17RR3 467 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 FJX1Q86VR8 437 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 ZNF611Q8N823 705 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 TMEM229BQ8NBD8 167 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 FAM122AQ96E09 287 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 Q96M66 194 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 USB1Q9BQ65 265 aaKnown RBP16.79■□□□□ 0.28
CLN6-205ENST00000564846 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLN6-205ENST00000564846 MCUBQ9NWR8 336 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 ELOVL5Q9NYP7 299 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 SH3BGRL2Q9UJC5 107 aa16.79■□□□□ 0.28
CLN6-205ENST00000564846 IGKV1-12A0A0C4DH73 117 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 ZNF732B4DXR9 585 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 IGKV1D-12P01611 117 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 RCVRNP35243 200 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 GPM6AP51674 278 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 CCR6P51684 374 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 TATDN3Q17R31 274 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 CALHM1Q8IU99 346 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 SAXO1Q8IYX7 474 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 OR51F2Q8NH61 342 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 NUDT15Q9NV35 164 aa16.78■□□□□ 0.28
CLN6-205ENST00000564846 NOP16Q9Y3C1 178 aaKnown RBP16.78■□□□□ 0.28
CLN6-205ENST00000564846 IGHV2OR16-5A0A0B4J2B6 119 aa16.77■□□□□ 0.28
CLN6-205ENST00000564846 TMEM8BA6NDV4 472 aa16.77■□□□□ 0.28
CLN6-205ENST00000564846 MFNGO00587 321 aa16.77■□□□□ 0.28
CLN6-205ENST00000564846 LILRA1O75019 489 aa16.77■□□□□ 0.28
CLN6-205ENST00000564846 CYB5AP00167 134 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms