RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.28□□□□□ -1.08
SF3B3-204ENST00000563739 A0A1W2PQ09 198 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 C3orf84H3BNL1 204 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 H1F0P07305 194 aaKnown RBP8.28□□□□□ -1.08
SF3B3-204ENST00000563739 NDUFB7P17568 137 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 RPS6KA3P51812 740 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 SPIBQ01892 262 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 FGD3Q5JSP0 725 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 C1orf146Q5VVC0 180 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 SMARCD3Q6STE5 483 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 ZNF782Q6ZMW2 699 aaPredicted RBP8.28□□□□□ -1.08
SF3B3-204ENST00000563739 C18orf65Q6ZTR6 163 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 DCXRQ7Z4W1 244 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 MRPL41Q8IXM3 137 aaKnown RBP8.28□□□□□ -1.08
SF3B3-204ENST00000563739 ADGRG5Q8IZF4 528 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 FAM185AQ8N0U4 392 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 OR5AU1Q8NGC0 362 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 OR5D13Q8NGL4 314 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 FANK1Q8TC84 345 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 SDSLQ96GA7 329 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 SP140LQ9H930 580 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 NLKQ9UBE8 527 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 POMPQ9Y244 141 aa8.28□□□□□ -1.08
SF3B3-204ENST00000563739 TRBV23-1A0A0A0MS06 115 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 DHRS12A0PJE2 317 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 OR2AT4A6NND4 320 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 FAM90A22PA8MWA6 464 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 XRCC2O43543 280 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 FKBP6O75344 327 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 KRT36O76013 467 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 AMY1AP04745 511 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 AMY2AP04746 511 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 CCDC159P0C7I6 412 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 VDAC2P45880 294 aaPredicted RBP8.27□□□□□ -1.09
SF3B3-204ENST00000563739 GSK3AP49840 483 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 SLC36A3Q495N2 470 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 FAM98BQ52LJ0 330 aaKnown RBP8.27□□□□□ -1.09
SF3B3-204ENST00000563739 TMEM200BQ69YZ2 307 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 SPATA24Q86W54 205 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 LINC00471Q8N535 108 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 CD177Q8N6Q3 437 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 CYB561A3Q8NBI2 242 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 OR51L1Q8NGJ5 315 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 OR8D4Q8NGM9 314 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 OR2AJ1Q8NGZ0 328 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 OR8S1Q8NH09 359 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 OR5P3Q8WZ94 311 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 STMN2Q93045 179 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 SPTSSAQ969W0 71 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 SLAMF6Q96DU3 332 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 KCNJ15Q99712 375 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 PRSS22Q9GZN4 317 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 OPA3Q9H6K4 179 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 KCNG2Q9UJ96 466 aa8.27□□□□□ -1.09
SF3B3-204ENST00000563739 LCE6AA0A183 80 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 TCRBV3S1A0A5B6 114 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 ANKRD30BLA7E2S9 258 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 H0YAE9 185 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 TIPRLO75663 272 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 CHRM2P08172 466 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 RAP2AP10114 183 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 PF4V1P10720 104 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 RRM2P31350 389 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 GRK5P34947 590 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 DDOSTP39656 456 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 NAA10P41227 235 aaPredicted RBP8.26□□□□□ -1.09
SF3B3-204ENST00000563739 GSSP48637 474 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 CEBPDP49716 269 aaPredicted RBP8.26□□□□□ -1.09
SF3B3-204ENST00000563739 DYNLT3P51808 116 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 SLC25A1P53007 311 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 SMIM11AP58511 58 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 SLC34A1Q06495 639 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.26□□□□□ -1.09
SF3B3-204ENST00000563739 PRDX4Q13162 271 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 RCN1Q15293 331 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 LINC01590Q5TEZ4 76 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 ZNF626Q68DY1 528 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 KRT74Q7RTS7 529 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 RNF144BQ7Z419 303 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 TMEM185AQ8NFB2 350 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 OR52J3Q8NH60 311 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 MED30Q96HR3 178 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 REEP6Q96HR9 211 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 COPS4Q9BT78 406 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 NMNAT2Q9BZQ4 307 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 PCDHGB5Q9Y5G0 923 aa8.26□□□□□ -1.09
SF3B3-204ENST00000563739 SH2D7A6NKC9 451 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-204ENST00000563739 C17orf98A8MV24 154 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 MTRF1O75570 445 aaKnown RBP8.25□□□□□ -1.09
SF3B3-204ENST00000563739 GADD45GO95257 159 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 RENP00797 406 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 PF4P02776 101 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 CLUP10909 449 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 FAHP16930 419 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 HOXB6P17509 224 aaKnown RBP8.25□□□□□ -1.09
SF3B3-204ENST00000563739 CX3CR1P49238 355 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 MZT1Q08AG7 82 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 DMRTC1Q5HYR2 192 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 SLC35F1Q5T1Q4 408 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 ZNF511Q8NB15 262 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms