RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 HPSE2Q8WWQ2 592 aa15.5■□□□□ 0.07
COMMD4-208ENST00000563220 DVL3Q92997 716 aaPredicted RBP15.5■□□□□ 0.07
COMMD4-208ENST00000563220 RNF170Q96K19 258 aa15.5■□□□□ 0.07
COMMD4-208ENST00000563220 DMRTA2Q96SC8 542 aa15.5■□□□□ 0.07
COMMD4-208ENST00000563220 MMP28Q9H239 520 aa15.5■□□□□ 0.07
COMMD4-208ENST00000563220 CACNG2Q9Y698 323 aa15.5■□□□□ 0.07
COMMD4-208ENST00000563220 PLATP00750 562 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 CALCRP30988 508 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 ATRXP46100 2492 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 ZNF260Q3ZCT1 412 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 RAB12Q6IQ22 244 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 RTN4RL2Q86UN3 420 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 S100A13Q99584 98 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 VKORC1Q9BQB6 163 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 TMEM59Q9BXS4 323 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 ACTR6Q9GZN1 396 aa15.49■□□□□ 0.07
COMMD4-208ENST00000563220 ELL3Q9HB65 397 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-208ENST00000563220 IGHV2OR16-5A0A0B4J2B6 119 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 TRGV8A0A0C4DH27 118 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 SERPINA2P20848 420 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 PRSS3P35030 304 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 IFITM2Q01629 132 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 CEACAM21Q3KPI0 293 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 ALKBH2Q6NS38 261 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 PCSK4Q6UW60 755 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 ASCL4Q6XD76 172 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 ZDHHC23Q8IYP9 409 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 ST6GALNAC3Q8NDV1 305 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 OR10R2Q8NGX6 335 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 CPNE2Q96FN4 548 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-208ENST00000563220 JKAMPQ9P055 326 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 IGKV1-12A0A0C4DH73 117 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 PQLC2LA1A4F0 135 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 H7C417 338 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 SOCS1O15524 211 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 IGKV1D-12P01611 117 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 GSTT2P0CG29 244 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 GSTT2BP0CG30 244 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 MGMTP16455 207 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 BTCP35070 178 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 ZNF83P51522 516 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 NKX2-5P52952 324 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-208ENST00000563220 RPS27AP62979 156 aaKnown RBP15.48■□□□□ 0.07
COMMD4-208ENST00000563220 PDZK1IP1Q13113 114 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 ALKBH6Q3KRA9 238 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 ZFP69Q49AA0 526 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 CDNFQ49AH0 187 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 TMEM255AQ5JRV8 349 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 CDH24Q86UP0 819 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 CALHM1Q8IU99 346 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 FTMTQ8N4E7 242 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 CHST4Q8NCG5 386 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 AQP3Q92482 292 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 SEH1LQ96EE3 360 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 CYYR1Q96J86 154 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 SELENOIQ9C0D9 397 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 CST11Q9H112 138 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 MTFP1Q9UDX5 166 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 MEMO1Q9Y316 297 aa15.48■□□□□ 0.07
COMMD4-208ENST00000563220 FAM172BPA6NC97 362 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 MEIS3P1A6NDR6 274 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 TMEM235A6NFC5 223 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 ANKRD30BLA7E2S9 258 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 CHRM2P08172 466 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 SFTPCP11686 197 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 CCKARP32238 428 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 TMEM50BP56557 158 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 PSG7Q13046 419 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 DYRK1AQ13627 763 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 PLET1Q6UQ28 207 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 FAM89BQ8N5H3 189 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 STEAP2Q8NFT2 490 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 GPX8Q8TED1 209 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 RND1Q92730 232 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 MUCL1Q96DR8 90 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 MARS2Q96GW9 593 aaKnown RBP15.47■□□□□ 0.07
COMMD4-208ENST00000563220 METTL9Q9H1A3 318 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 NLKQ9UBE8 527 aa15.47■□□□□ 0.07
COMMD4-208ENST00000563220 FAM240BA0A1B0GVZ2 78 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 RBBP9O75884 186 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 RAC2P15153 192 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 GNB3P16520 340 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 SLC6A1P30531 599 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 MPV17P39210 176 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 RAD52P43351 418 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 GPM6AP51674 278 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 NAAAQ02083 359 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 PPA1Q15181 289 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 PLAC9Q5JTB6 97 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 TMEM211Q6ICI0 200 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 Q6ZTK2 550 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 OR51T1Q8NGJ9 327 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 KLF14Q8TD94 323 aaPredicted RBP15.46■□□□□ 0.07
COMMD4-208ENST00000563220 OR5P3Q8WZ94 311 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 NUDT16L1Q9BRJ7 211 aaKnown RBP15.46■□□□□ 0.07
COMMD4-208ENST00000563220 URM1Q9BTM9 101 aaKnown RBP15.46■□□□□ 0.07
COMMD4-208ENST00000563220 ELOVL5Q9NYP7 299 aa15.46■□□□□ 0.07
COMMD4-208ENST00000563220 A0A0B4J293 547 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 ANKRD20A5PA0PJZ0 165 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 CENPXA8MT69 81 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms