RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 FAM206AQ9NX38 181 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 TRBV23-1A0A0A0MS06 115 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 A0A0U1RQV5 110 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 MEGF11A6BM72 1044 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 H0YAE9 185 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PSMD9O00233 223 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ANGPTL7O43827 346 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 IGLV3-1P01715 115 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 MAP2K3P46734 347 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 EFNB2P52799 333 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 LY6EQ16553 131 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 SLC35D3Q5M8T2 416 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CRIP3Q6Q6R5 217 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 KRT77Q7Z794 578 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 HS3ST5Q8IZT8 346 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 FAM185AQ8N0U4 392 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 OR51G2Q8NGK0 314 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 OR5D13Q8NGL4 314 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 AQP3Q92482 292 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CCDC124Q96CT7 223 aaKnown RBP13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CLPTM1LQ96KA5 538 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 YY1AP1Q9H869 796 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 LAMP5Q9UJQ1 280 aa13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 SF3B6Q9Y3B4 125 aaKnown RBP13.59□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 TMEM269A0A1B0GVZ9 245 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 PRR32B1ATL7 298 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 MTRF1O75570 445 aaKnown RBP13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 HMGN1P05114 100 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 OSMP13725 252 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 RPS7P62081 194 aaKnown RBP13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 HERPUD1Q15011 391 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 TMEM236Q5W0B7 351 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 HAGHLQ6PII5 290 aaPredicted RBP13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 MKXQ8IYA7 352 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 C11orf42Q8N5U0 333 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 CD177Q8N6Q3 437 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 LRGUKQ96M69 825 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 MEGF9Q9H1U4 602 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 FOXJ3Q9UPW0 622 aa13.58□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 OR5B21A6NL26 309 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 G3V4G9 280 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 MRPL3P09001 348 aaKnown RBP13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 T-ENOLP0DO92 83 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 FAHP16930 419 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 KIR2DS4P43632 304 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 APOFQ13790 326 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 LRRC75BQ2VPJ9 315 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 ACP7Q6ZNF0 438 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 MOB3CQ70IA8 216 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 THAP5Q7Z6K1 395 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 OR5A2Q8NGI9 324 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 ZNF671Q8TAW3 534 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 OR51E1Q8TCB6 317 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 CANT1Q8WVQ1 401 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 PPP1R14AQ96A00 147 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 ZNF488Q96MN9 340 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 TEAD3Q99594 435 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 PBOV1Q9GZY1 135 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 FAM234AQ9H0X4 552 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 GPR84Q9NQS5 396 aa13.57□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 ACOD1A6NK06 481 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 RFPL4AA6NLU0 287 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 RFPL4AL1F8VTS6 287 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 GNGT2O14610 69 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 SYNGR1O43759 233 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 CHST1O43916 411 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 PRKACGP22612 351 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 CALB2P22676 271 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 CAPZA1P52907 286 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 ERVFRD-1P60508 538 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 MFGE8Q08431 387 aaPredicted RBP13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 RIPPLY1Q0D2K3 151 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 PLCXD3Q63HM9 321 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 TMEM200BQ69YZ2 307 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 KCTD18Q6PI47 426 aaPredicted RBP13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 DEGS2Q6QHC5 323 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 Q6ZTK2 550 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 COMMD2Q86X83 199 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 C11orf44Q8N8P7 122 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 POC1AQ8NBT0 407 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 OR4C13Q8NGP0 309 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 OR5K1Q8NHB7 308 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 PIFOQ8TCI5 191 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 CFHR4Q92496 578 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 TTTY10Q9BZA0 68 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 YIPF3Q9GZM5 350 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 RASL12Q9NYN1 266 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 COPS3Q9UNS2 423 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 PIGLQ9Y2B2 252 aa13.56□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 CCDC182A6NF36 153 aa13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 ATP6V1B1P15313 513 aa13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 CCL3L1P16619 93 aa13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 CEBPDP49716 269 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 BMXP51813 675 aa13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 RPL31P62899 125 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 ROM1Q03395 351 aa13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 AANATQ16613 207 aa13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 BEAN1Q3B7T3 259 aa13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 ZBTB37Q5TC79 503 aa13.55□□□□□ -0.24
VPS9D1-AS1-201ENST00000562298 KLHDC1Q8N7A1 406 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms