RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 NPY4RP50391 375 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 NANOS3P60323 173 aaKnown RBP9.04□□□□□ -0.96
TPM1-229ENST00000561242 MLLT11Q13015 90 aaPredicted RBP9.04□□□□□ -0.96
TPM1-229ENST00000561242 ZNF154Q13106 437 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 BLMHQ13867 455 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 RSU1Q15404 277 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 MPPED2Q15777 294 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 ACSM3Q53FZ2 586 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 ARMCX4Q5H9R4 360 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 GLT8D1Q68CQ7 371 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 DCDC5Q6ZRR9 648 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 CEACAM19Q7Z692 300 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 LRRC28Q86X40 367 aaPredicted RBP9.04□□□□□ -0.96
TPM1-229ENST00000561242 JAGN1Q8N5M9 183 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 MAPK1IP1LQ8NDC0 245 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 PHYHIPQ92561 330 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 FOXRED1Q96CU9 486 aaPredicted RBP9.04□□□□□ -0.96
TPM1-229ENST00000561242 NEIL1Q96FI4 390 aaPredicted RBP9.04□□□□□ -0.96
TPM1-229ENST00000561242 MGLLQ99685 303 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 EXOSC4Q9NPD3 245 aaKnown RBP9.04□□□□□ -0.96
TPM1-229ENST00000561242 ACOT13Q9NPJ3 140 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 CLN8Q9UBY8 286 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 SSR3Q9UNL2 185 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 ING4Q9UNL4 249 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 RELNP78509 3460 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 hCG_1809904A0A1W2PP81 198 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 A0A1W2PPE2 198 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 A0A1W2PR64 198 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 A0A1W2PRV1 198 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 FUOMA2VDF0 154 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 E9PI62 339 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 TMPRSS2O15393 492 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 AKR7A2O43488 359 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 CD1AP06126 327 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 ZNF93P35789 620 aaPredicted RBP9.03□□□□□ -0.96
TPM1-229ENST00000561242 ACSM1Q08AH1 577 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 DOC2BQ14184 412 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 TBCEQ15813 527 aaPredicted RBP9.03□□□□□ -0.96
TPM1-229ENST00000561242 TMEM249Q2WGJ8 235 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 TIMM50Q3ZCQ8 353 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 HSD17B12Q53GQ0 312 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 DDI2Q5TDH0 399 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 LIPKQ5VXJ0 399 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 FAHD2BQ6P2I3 314 aaPredicted RBP9.03□□□□□ -0.96
TPM1-229ENST00000561242 PIP4P2Q8N4L2 257 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 TSPAN14Q8NG11 270 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 CLDND2Q8NHS1 167 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 EMG1Q92979 244 aaKnown RBP9.03□□□□□ -0.96
TPM1-229ENST00000561242 C12orf43Q96C57 262 aaKnown RBP9.03□□□□□ -0.96
TPM1-229ENST00000561242 FAHD2AQ96GK7 314 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 CEP19Q96LK0 163 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 MRI1Q9BV20 369 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 PKIBQ9C010 78 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 SHARPINQ9H0F6 387 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 METTL9Q9H1A3 318 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 OR51I2Q9H344 312 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 LPAR2Q9HBW0 351 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 SMURF1Q9HCE7 757 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 FKBP14Q9NWM8 211 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 NLKQ9UBE8 527 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 CACNG2Q9Y698 323 aa9.03□□□□□ -0.96
TPM1-229ENST00000561242 SPENQ96T58 3664 aaKnown RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 TRAV20A0A0B4J274 112 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 A0A0G2JMP0 313 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 A0A0X1KG70 313 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 A8MV72 311 aaPredicted RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 CCRL2O00421 344 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 SH2D1BO14796 132 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 GPR37O15354 613 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 LMX1BO60663 402 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 ZNF780AO75290 641 aaPredicted RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 RP2O75695 350 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 RGS9O75916 674 aaPredicted RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 KDM4BO94953 1096 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 IGLV3-1P01715 115 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 GYPAP02724 150 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 MAS1P04201 325 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 NDUFB7P17568 137 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 GATA3P23771 443 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 CD80P33681 288 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 MAP2K4P45985 399 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 PITPNBP48739 271 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 IL24Q13007 206 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 KCTD21Q4G0X4 260 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 DCAF12L2Q5VW00 463 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 DMKNQ6E0U4 476 aaPredicted RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 ZNF773Q6PK81 442 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 ZNF826PQ6ZT77 177 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 SLC25A26Q70HW3 274 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 ANGPTL5Q86XS5 388 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 CMTM4Q8IZR5 234 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 PARP16Q8N5Y8 322 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 NKAIN3Q8N8D7 197 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 OR4M2Q8NGB6 313 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 TBC1D15Q8TC07 691 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 TNFAIP8L1Q8WVP5 186 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 H1FXQ92522 213 aaKnown RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 TMEM203Q969S6 136 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 ADAT3Q96EY9 351 aaPredicted RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 COX4I2Q96KJ9 171 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms