RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 FAM3AP98173 230 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 ZNF273Q14593 569 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 FAM76BQ5HYJ3 339 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 DLEU7Q6UYE1 221 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 LCNL1Q6ZST4 164 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 C17orf53Q8N3J3 647 aaPredicted RBP8.08□□□□□ -1.12
APH1B-208ENST00000560353 Q8N3U1 123 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 ZNF561Q8N587 486 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 CSNK2A3Q8NEV1 391 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 OR4C15Q8NGM1 316 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 LINC00476Q8WZB0 136 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 SPATA25Q9BR10 227 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 PPP1R3EQ9H7J1 279 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 DCLRE1BQ9H816 532 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 SP140LQ9H930 580 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 TBC1D23Q9NUY8 699 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 THAP1Q9NVV9 213 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 KCNG2Q9UJ96 466 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 RHBDD3Q9Y3P4 386 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 N6AMT1Q9Y5N5 214 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 MPC1Q9Y5U8 109 aa8.08□□□□□ -1.12
APH1B-208ENST00000560353 DNAJC8O75937 253 aaPredicted RBP8.07□□□□□ -1.12
APH1B-208ENST00000560353 NDUFB2O95178 105 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 TXNDC12O95881 172 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 HLA-DQA2P01906 255 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 TROVE2P10155 538 aaKnown RBP eCLIP8.07□□□□□ -1.12
APH1B-208ENST00000560353 SLC2A1P11166 492 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 FSTP19883 344 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 CFL1P23528 166 aaKnown RBP8.07□□□□□ -1.12
APH1B-208ENST00000560353 HTR1DP28221 377 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 ACTA2P62736 377 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 ACTG2P63267 376 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 ACTC1P68032 377 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 ACTA1P68133 377 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 IFFO1Q0D2I5 559 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 KRT72Q14CN4 511 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 TIGD6Q17RP2 521 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 DEFB136Q30KP8 78 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 ZBTB49Q6ZSB9 765 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 KCTD8Q6ZWB6 473 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 ZNF429Q86V71 674 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 OR5P3Q8WZ94 311 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 RNF170Q96K19 258 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 PRRC1Q96M27 445 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 GPX7Q96SL4 187 aaPredicted RBP8.07□□□□□ -1.12
APH1B-208ENST00000560353 ROPN1BQ9BZX4 212 aaPredicted RBP8.07□□□□□ -1.12
APH1B-208ENST00000560353 NSRP1Q9H0G5 558 aaKnown RBP8.07□□□□□ -1.12
APH1B-208ENST00000560353 ROPN1Q9HAT0 212 aaPredicted RBP8.07□□□□□ -1.12
APH1B-208ENST00000560353 ABCB9Q9NP78 766 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 PAPOLBQ9NRJ5 636 aaKnown RBP8.07□□□□□ -1.12
APH1B-208ENST00000560353 RASL12Q9NYN1 266 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 CCDC167Q9P0B6 97 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 IER3IP1Q9Y5U9 82 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 SORL1Q92673 2214 aa8.07□□□□□ -1.12
APH1B-208ENST00000560353 SERPINE3A8MV23 424 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 PRR23D1E9PI22 279 aaPredicted RBP8.06□□□□□ -1.12
APH1B-208ENST00000560353 SLC22A2O15244 555 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 MTRF1O75570 445 aaKnown RBP8.06□□□□□ -1.12
APH1B-208ENST00000560353 LY6G6CO95867 125 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 IFNA14P01570 189 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 PRR23D2P0DMB1 279 aaPredicted RBP8.06□□□□□ -1.12
APH1B-208ENST00000560353 PIPP12273 146 aaPredicted RBP8.06□□□□□ -1.12
APH1B-208ENST00000560353 PRDX2P32119 198 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 DCTDP32321 178 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 GPR4P46093 362 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 CDX1P47902 265 aaPredicted RBP8.06□□□□□ -1.12
APH1B-208ENST00000560353 RPS6KA3P51812 740 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 PRKXP51817 358 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 MTPNP58546 118 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 TRAM2Q15035 370 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 TAF13Q15543 124 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 SNAPC1Q16533 368 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 VMACQ2NL98 169 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 TEX38Q6PEX7 206 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 C16orf89Q6UX73 402 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 ZNF730Q6ZMV8 503 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 DPY19L2P2Q6ZN68 376 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 MBOAT2Q6ZWT7 520 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 CD177Q8N6Q3 437 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 ZNF671Q8TAW3 534 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 SGK3Q96BR1 496 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 REEP6Q96HR9 211 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 NOL4LQ96MY1 436 aaPredicted RBP8.06□□□□□ -1.12
APH1B-208ENST00000560353 KCNJ15Q99712 375 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 COPS4Q9BT78 406 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 FNDC11Q9BVV2 318 aa8.06□□□□□ -1.12
APH1B-208ENST00000560353 KAT8Q9H7Z6 458 aaKnown RBP8.06□□□□□ -1.12
APH1B-208ENST00000560353 IGHV2-26A0A0B4J1V2 119 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 TRIM64CA6NLI5 447 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 RFPL4AA6NLU0 287 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 RFPL4AL1F8VTS6 287 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 CCRL2O00421 344 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 TBX1O43435 398 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 SNNO75324 88 aaPredicted RBP8.05□□□□□ -1.12
APH1B-208ENST00000560353 RENP00797 406 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 ZNF823P16415 610 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 PRDX4Q13162 271 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 NANOGP8Q6NSW7 305 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 RRM2BQ7LG56 351 aa8.05□□□□□ -1.12
APH1B-208ENST00000560353 ZBTB46Q86UZ6 589 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms