RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 C1QL1O75973 258 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 SELEP16581 610 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 AGAP20933 346 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 MPV17P39210 176 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 SCAND1P57086 179 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 NKX6-1P78426 367 aaPredicted RBP9.62□□□□□ -0.87
USP3-218ENST00000560202 TFF3Q07654 80 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 PSG7Q13046 419 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 PRDX4Q13162 271 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 SNTB2Q13425 540 aaKnown RBP9.62□□□□□ -0.87
USP3-218ENST00000560202 SNTB1Q13884 538 aaKnown RBP9.62□□□□□ -0.87
USP3-218ENST00000560202 KISS1Q15726 138 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 ZNF718Q3SXZ3 478 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 PLCXD3Q63HM9 321 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 METAP1DQ6UB28 335 aaPredicted RBP9.62□□□□□ -0.87
USP3-218ENST00000560202 OR51D1Q8NGF3 324 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 OR4D6Q8NGJ1 314 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 ITLN2Q8WWU7 325 aaPredicted RBP9.62□□□□□ -0.87
USP3-218ENST00000560202 DEDD2Q8WXF8 326 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 FAM3DQ96BQ1 224 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 DIRAS2Q96HU8 199 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 RADILQ96JH8 1075 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 DMRTB1Q96MA1 342 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 GPER1Q99527 375 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 GPR160Q9UJ42 338 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 ADAM30Q9UKF2 790 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 SLC7A11Q9UPY5 501 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 ETV7Q9Y603 341 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 RELNP78509 3460 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 A0A0G2JMP0 313 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 FAM230AA0A1W2PPH8 454 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 IQCF6A8MYZ5 107 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 SNAPC5O75971 98 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 CLDN14O95500 239 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 HLA-DQB1P01920 261 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 ARSBP15848 533 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 ELK1P19419 428 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 GCH1P30793 250 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 GLRXP35754 106 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 EVX1P49640 407 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 FABP6P51161 128 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 FUT6P51993 359 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 MTCP1P56278 107 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 MAB21L1Q13394 359 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 RIN1Q13671 783 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 C2orf76Q3KRA6 126 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 ALKBH6Q3KRA9 238 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 MBNL2Q5VZF2 373 aaKnown RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 RGS7BPQ6MZT1 257 aaPredicted RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 CRIP3Q6Q6R5 217 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 LRRC28Q86X40 367 aaPredicted RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 ZDHHC23Q8IYP9 409 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 ZNF808Q8N4W9 903 aaPredicted RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 LINC01560Q8TB33 94 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 BORCS8Q96FH0 119 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 CMTM3Q96MX0 182 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 RANGRFQ9HD47 186 aaPredicted RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 MRPL15Q9P015 296 aaKnown RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 PURGQ9UJV8 347 aaKnown RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 FZR1Q9UM11 496 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 MPC1Q9Y5U8 109 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 NBASA2RRP1 2371 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 LOC100289279A0A1B0GTE1 492 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 ABCD4O14678 606 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 EIF4EP06730 217 aaKnown RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 KITLGP21583 273 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 TALDO1P37837 337 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 OR3A4PP47883 348 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 POU3F4P49335 361 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 RBP2P50120 134 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 BSPH1Q075Z2 132 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 CEACAM21Q3KPI0 293 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 TMEM255AQ5JRV8 349 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 UBE2NLQ5JXB2 153 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 AWAT2Q6E213 333 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 CNIH2Q6PI25 160 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 PLET1Q6UQ28 207 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 LHFPL2Q6ZUX7 228 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 ANGPTL5Q86XS5 388 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 PNLDC1Q8NA58 520 aaKnown RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 DUSP18Q8NEJ0 188 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 ENKURQ8TC29 256 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 RFT1Q96AA3 541 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 CPNE2Q96FN4 548 aaPredicted RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 HIST1H2AAQ96QV6 131 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 CITED4Q96RK1 184 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 PLSCR3Q9NRY6 295 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 CYSLTR2Q9NS75 346 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 C14orf119Q9NWQ9 140 aa9.61□□□□□ -0.87
USP3-218ENST00000560202 MRPS28Q9Y2Q9 187 aaKnown RBP9.61□□□□□ -0.87
USP3-218ENST00000560202 IGKV1-27A0A075B6S5 117 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 TMEM272A0A1B0GTI8 110 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 A0A1W2PQ09 198 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 FABP12A6NFH5 140 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 TUBAL3A6NHL2 446 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 LEUTXA8MZ59 168 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 BPNT1O95861 308 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 CA6P23280 308 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 PTGFRP43088 359 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 MMP15P51511 669 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms