RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DNAJC9-AS1A6NH13 148 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 OR2AT4A6NND4 320 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 ZNF879B4DU55 563 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 SULT1C4O75897 302 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 ECDO95905 644 aaPredicted RBP6.79□□□□□ -1.32
SNX1-207ENST00000559401 IGLV3-1P01715 115 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 LIPFP07098 398 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 SELLP14151 372 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 NDUFB7P17568 137 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 CFHR2P36980 270 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 HAAOP46952 286 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 CAPZA1P52907 286 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 SNRPGP62308 76 aaKnown RBP6.79□□□□□ -1.32
SNX1-207ENST00000559401 ARF6P62330 175 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 IL13RA1P78552 427 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 ZNF85Q03923 595 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 ZNF91Q05481 1191 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 BAMBIQ13145 260 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 OCLNQ16625 522 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 ZSCAN26Q16670 478 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 RUSC1-AS1Q66K80 236 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 STUMQ69YW2 141 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 CATSPERDQ86XM0 798 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 ZNF573Q86YE8 665 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 ZNF555Q8NEP9 628 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 TMEM185AQ8NFB2 350 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 OR14K1Q8NGZ2 314 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 ZFAND2BQ8WV99 257 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 AQP3Q92482 292 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 RORBQ92753 470 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 GCDHQ92947 438 aaPredicted RBP6.79□□□□□ -1.32
SNX1-207ENST00000559401 ZDHHC16Q969W1 377 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 DACT3Q96B18 629 aaPredicted RBP6.79□□□□□ -1.32
SNX1-207ENST00000559401 MRPL48Q96GC5 212 aaKnown RBP6.79□□□□□ -1.32
SNX1-207ENST00000559401 ZNF488Q96MN9 340 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 SLC29A1Q99808 456 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 OR51I2Q9H344 312 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 ESM1Q9NQ30 184 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 KAAG1Q9UBP8 84 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 SLC7A11Q9UPY5 501 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 V9GYS6 101 aa6.79□□□□□ -1.32
SNX1-207ENST00000559401 MDFIC2A0A1B0GVS7 189 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 ANKRD61A6NGH8 418 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 J3QLW9 94 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 J3QT63 122 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 DLGAP1O14490 977 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 TNFRSF13BO14836 293 aaPredicted RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 SLC16A6O15403 523 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 SYNGR1O43759 233 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 MPZL2O60487 215 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 GATBO75879 557 aaKnown RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 INMTO95050 263 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 NXPH2O95156 264 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 PLATP00750 562 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 SERPINA3P01011 423 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 HTR1AP08908 422 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 OCM2P0CE71 109 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 OCMP0CE72 109 aaPredicted RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 UBCP0CG48 685 aaKnown RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 PPIAL4GP0DN37 164 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 DBTP11182 482 aaKnown RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 ZNF19P17023 458 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 ZNF20P17024 532 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 ACTA2P62736 377 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 UBA52P62987 128 aaKnown RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 ACTG2P63267 376 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 LRRC36Q1X8D7 754 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 SMIM21Q3B7S5 101 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 FAM76BQ5HYJ3 339 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 ZNF788Q6ZQV5 615 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 PDZD9Q8IXQ8 264 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 ENTHD1Q8IYW4 607 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 CMTM4Q8IZR5 234 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 PRSS35Q8N3Z0 413 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 ACBD7Q8N6N7 88 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 ZDHHC22Q8N966 263 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 FAM216AQ8WUB2 273 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 LHX4Q969G2 390 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 MED30Q96HR3 178 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 Q96MT0 163 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 WDFY2Q96P53 400 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 GAFA1Q96PS6 74 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 DNTTIP1Q9H147 329 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 AMBNQ9NP70 447 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 TNFRSF19Q9NS68 423 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 FAM118AQ9NWS6 357 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 SMPD3Q9NY59 655 aaPredicted RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 SLC25A10Q9UBX3 287 aaPredicted RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 OR14J1Q9UGF5 321 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 RPUSD1Q9UJJ7 312 aaKnown RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 POLDIP2Q9Y2S7 368 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 PCDHGB1Q9Y5G3 927 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 SOX21Q9Y651 276 aaPredicted RBP6.78□□□□□ -1.32
SNX1-207ENST00000559401 STAB1Q9NY15 2570 aa6.78□□□□□ -1.32
SNX1-207ENST00000559401 LOC100130705A0A1B0GUX0 176 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 PQLC2LA1A4F0 135 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 DHRS7CA6NNS2 312 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 SLC1A7O00341 560 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 GPR37O15354 613 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms