RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 HHLA2Q9UM44 414 aa9.56□□□□□ -0.88
SNX1-204ENST00000559061 NOP16Q9Y3C1 178 aaKnown RBP9.56□□□□□ -0.88
SNX1-204ENST00000559061 ZFHX3Q15911 3703 aa9.56□□□□□ -0.88
SNX1-204ENST00000559061 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.55□□□□□ -0.88
SNX1-204ENST00000559061 PNMA8CA0A1B0GUJ8 204 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 MAGEA13PA6NCF6 341 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 OR5B21A6NL26 309 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 A6NLC8 198 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 ANXA2P2A6NMY6 339 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 F8VVB4 439 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 F8VWA3 439 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 PIN1P1O15428 100 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 MPZP25189 248 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 MDH2P40926 338 aaKnown RBP9.55□□□□□ -0.88
SNX1-204ENST00000559061 GP2P55259 537 aaKnown RBP9.55□□□□□ -0.88
SNX1-204ENST00000559061 GNG3P63215 75 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 SLC3A1Q07837 685 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 ACSM1Q08AH1 577 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 INSL4Q14641 139 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 RBM48Q5RL73 367 aaKnown RBP9.55□□□□□ -0.88
SNX1-204ENST00000559061 TEX36Q5VZQ5 186 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 SFRP4Q6FHJ7 346 aaPredicted RBP9.55□□□□□ -0.88
SNX1-204ENST00000559061 ZNF841Q6ZN19 808 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 UTS2BQ765I0 119 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 PRSS48Q7RTY5 328 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 ANGPTL5Q86XS5 388 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 FTMTQ8N4E7 242 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 PARP16Q8N5Y8 322 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 CCDC54Q8NEL0 328 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 OR51A2Q8NGJ7 313 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 OR13C3Q8NGS6 347 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 GHSRQ92847 366 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 RAB1CQ92928 201 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 DACT3Q96B18 629 aaPredicted RBP9.55□□□□□ -0.88
SNX1-204ENST00000559061 C10orf35Q96D05 121 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 MRPL48Q96GC5 212 aaKnown RBP9.55□□□□□ -0.88
SNX1-204ENST00000559061 NKX3-1Q99801 234 aaPredicted RBP9.55□□□□□ -0.88
SNX1-204ENST00000559061 TRIM36Q9NQ86 728 aa9.55□□□□□ -0.88
SNX1-204ENST00000559061 SONP18583 2426 aaKnown RBP9.54□□□□□ -0.88
SNX1-204ENST00000559061 PPIAL4EA0A075B759 164 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 TRBV5-7A0A0A0MS05 114 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 ISPDA4D126 451 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 PPIAL4DF5H284 164 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 IFNL4K9M1U5 179 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 LGALS8O00214 317 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 MYL12BO14950 172 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 AKR7A2O43488 359 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 RGS10O43665 173 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 PLPP2O43688 288 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 WNT2P09544 360 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 PPIAL4FP0DN26 164 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 SELLP14151 372 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 ATF1P18846 271 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 SOX2P48431 317 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 PAX2Q02962 417 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 HAGHLQ6PII5 290 aaPredicted RBP9.54□□□□□ -0.88
SNX1-204ENST00000559061 BATF2Q8N1L9 274 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 BOLLQ8N9W6 283 aaKnown RBP9.54□□□□□ -0.88
SNX1-204ENST00000559061 DEFB108BQ8NET1 73 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 OR13C9Q8NGT0 318 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 OR10Z1Q8NGY1 313 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 HAVCR2Q8TDQ0 301 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 MYDGFQ969H8 173 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 TIMD4Q96H15 378 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 OPALINQ96PE5 141 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 SPACA5Q96QH8 159 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 GAL3ST1Q99999 423 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 MND1Q9BWT6 205 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 PPIL3Q9H2H8 161 aaKnown RBP9.54□□□□□ -0.88
SNX1-204ENST00000559061 PATZ1Q9HBE1 687 aaKnown RBP9.54□□□□□ -0.88
SNX1-204ENST00000559061 HES4Q9HCC6 221 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 SMURF1Q9HCE7 757 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 SCN3BQ9NY72 215 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 TAS2R4Q9NYW5 299 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 ZNF222Q9UK12 451 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 ZNF281Q9Y2X9 895 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 TPRKBQ9Y3C4 175 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 PPIAL4AQ9Y536 164 aa9.54□□□□□ -0.88
SNX1-204ENST00000559061 TRAV8-7A0A075B6U6 113 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 IGKV1-12A0A0C4DH73 117 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 FAM230AA0A1W2PPH8 454 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 hCG_1807616A0A1W2PRN6 198 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 OOEPA6NGQ2 149 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 A8MXK9 166 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 J3QT63 122 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 SC5DO75845 299 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 IGKV1D-12P01611 117 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 GYPAP02724 150 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 CD1AP06126 327 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 PGA5P0DJD9 388 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 IGFBP3P17936 291 aaPredicted RBP9.53□□□□□ -0.88
SNX1-204ENST00000559061 PCMT1P22061 227 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 AZGP1P25311 298 aaKnown RBP9.53□□□□□ -0.88
SNX1-204ENST00000559061 HAAOP46952 286 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 GABARAPL2P60520 117 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 ZP1P60852 638 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 ERVK11-1P61568 191 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 BDH1Q02338 343 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 SPHARQ15513 63 aa9.53□□□□□ -0.88
SNX1-204ENST00000559061 TBCEQ15813 527 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms