RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 KCTD9Q7L273 389 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 SLC35F2Q8IXU6 374 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 OR8B12Q8NGG6 310 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 ZNF671Q8TAW3 534 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 TMEM186Q96B77 213 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 RAB39BQ96DA2 213 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 Q96M66 194 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 SIGLEC11Q96RL6 698 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 APOL4Q9BPW4 351 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 OR10A2Q9H208 303 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 TOR3AQ9H497 397 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 CDC42EP3Q9UKI2 254 aa8.11□□□□□ -1.11
SPG11-214ENST00000558989 ANKRD30BLA7E2S9 258 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 TEX22C9J3V5 150 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 TMEM178BH3BS89 294 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 FAM20BO75063 409 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 RPP14O95059 124 aaKnown RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 LY86O95711 162 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 IGHV2-70P01814 119 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 IRF2P14316 349 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 SRD5A1P18405 259 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 MC5RP33032 325 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 SRP14P37108 136 aaKnown RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 BTG1P62324 171 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 ODF4Q2M2E3 257 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 NXNL2Q5VZ03 156 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 PRSS45Q7RTY3 260 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 NHLRC2Q8NBF2 726 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 OR8S1Q8NH09 359 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 OR51F2Q8NH61 342 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 KCTD12Q96CX2 325 aaKnown RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 WDFY2Q96P53 400 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 SLC29A1Q99808 456 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 PAPOLGQ9BWT3 736 aaKnown RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 MROQ9BYG7 248 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 YIPF3Q9GZM5 350 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 ADGRL4Q9HBW9 690 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 IMPAD1Q9NX62 359 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 ENOPH1Q9UHY7 261 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 hCG_38984A0A1B0GV85 526 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 TMEM269A0A1B0GVZ9 245 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 ANXA2P2A6NMY6 339 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 C22orf46C9J442 243 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 PHF1O43189 567 aaPredicted RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 APOC1P02654 83 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 ALPLP05186 524 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 KRT8P05787 483 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 HNF1AP20823 631 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 CD80P33681 288 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 UCP3P55916 312 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 MFGE8Q08431 387 aaPredicted RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 LRRC36Q1X8D7 754 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 KCTD21Q4G0X4 260 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 KCTD18Q6PI47 426 aaPredicted RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 ZNF322Q6U7Q0 402 aaPredicted RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 SSX6Q7RTT6 188 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 KLHL36Q8N4N3 616 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 OR10H4Q8NGA5 316 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 PIGCQ92535 297 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 STMN2Q93045 179 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 FAM71F1Q96KD3 344 aaPredicted RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 LYZL4Q96KX0 146 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 GABARAPL3Q9BY60 117 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 TMPRSS13Q9BYE2 586 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 METTL17Q9H7H0 456 aaPredicted RBP8.1□□□□□ -1.11
SPG11-214ENST00000558989 SP140LQ9H930 580 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 C1orf123Q9NWV4 160 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 RHBDD3Q9Y3P4 386 aa8.1□□□□□ -1.11
SPG11-214ENST00000558989 ACOD1A6NK06 481 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 LRRC30A6NM36 301 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 ZNF850A8MQ14 1090 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 ZNF670-ZNF695F2Z2N8 137 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 ADRA2CP18825 462 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 ZFP36P26651 326 aaKnown RBP8.09□□□□□ -1.11
SPG11-214ENST00000558989 RIDAP52758 137 aaKnown RBP8.09□□□□□ -1.11
SPG11-214ENST00000558989 DVL1P1P54792 670 aaPredicted RBP8.09□□□□□ -1.11
SPG11-214ENST00000558989 CDC42P60953 191 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 EFNB1P98172 346 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 KCTD8Q6ZWB6 473 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 GID4Q8IVV7 300 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 OR52H1Q8NGJ2 320 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 OR11L1Q8NGX0 322 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 EME1Q96AY2 570 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 OR8B4Q96RC9 309 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 MS4A7Q9GZW8 240 aaPredicted RBP8.09□□□□□ -1.11
SPG11-214ENST00000558989 NIPAL2Q9H841 368 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 AP5S1Q9NUS5 200 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 FBXL17Q9UF56 701 aa8.09□□□□□ -1.11
SPG11-214ENST00000558989 PPIAL4EA0A075B759 164 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 LOC105371242A0A075B767 164 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 IGHV3OR15-7A0A075B7D8 119 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.08□□□□□ -1.12
SPG11-214ENST00000558989 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 A6NIN4 97 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 CEACAM18A8MTB9 384 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 ADARB2-AS1A8MUL3 147 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 PPIAL4DF5H284 164 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 GMDSO60547 372 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms