RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 SERPINA2P20848 420 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 BMP5P22003 454 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 FBLP22087 321 aaKnown RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 MPGP29372 298 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 FGF8P55075 233 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 TMEM33P57088 247 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 TAS2R46P59540 309 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 PLA2G7Q13093 441 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 MEP1BQ16820 701 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 PCK2Q16822 640 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 WDR38Q5JTN6 314 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 PRAMEF17Q5VTA0 474 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 C1orf140Q5VVS0 124 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 C11orf87Q6NUJ2 197 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 PARM1Q6UWI2 310 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 H1FNTQ75WM6 255 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF627Q7L945 461 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 ZAR1Q86SH2 424 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 VASH2Q86V25 355 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 H1FOOQ8IZA3 346 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 HIST3H2BBQ8N257 126 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 MUC20Q8N307 709 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 GALNT16Q8N428 558 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 C17orf78Q8N4C9 275 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 BPIFB2Q8N4F0 458 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF610Q8N9Z0 462 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 SLC38A9Q8NBW4 561 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 PLPP5Q8NEB5 264 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 STEAP2Q8NFT2 490 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 OR13H1Q8NG92 308 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 OR2AJ1Q8NGZ0 328 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 OR4S2Q8NH73 311 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 KCNG3Q8TAE7 436 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF519Q8TB69 540 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 RNASE8Q8TDE3 154 aaKnown RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 SLC25A43Q8WUT9 341 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 ASB5Q8WWX0 329 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 SEH1LQ96EE3 360 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 GALNT14Q96FL9 552 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 TMEM56Q96MV1 263 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 ALKBH3Q96Q83 286 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 OR5B2Q96R09 309 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 SPSB2Q99619 263 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 GFI1Q99684 422 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 SMAD5Q99717 465 aaKnown RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 NRTNQ99748 197 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 SUCNR1Q9BXA5 334 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 C1QTNF6Q9BXI9 259 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 GPR87Q9BY21 358 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 PLA2G2FQ9BZM2 168 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 OR8D2Q9GZM6 311 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 CST11Q9H112 138 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 TLNRD1Q9H1K6 362 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 POFUT1Q9H488 388 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 RGCCQ9H4X1 137 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 DNAJC4Q9NNZ3 241 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 RAB18Q9NP72 206 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 CUTCQ9NTM9 273 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 TMEM100Q9NV29 134 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 DNAJB11Q9UBS4 358 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 VAX2Q9UIW0 290 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 TMED7Q9Y3B3 224 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 NOP16Q9Y3C1 178 aaKnown RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 FAM96BQ9Y3D0 163 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 TMEM56-RWDD3S4R434 201 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 A0A087WZY1 265 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 IGLV1-36A0A0B4J1U3 117 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 TMEM272A0A1B0GTI8 110 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 A0A1W2PNV4 684 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PGPEP1LA6NFU8 196 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF726A6NNF4 738 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 B4DGG1 531 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 C10orf142B7Z368 130 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 C22orf46C9J442 243 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 F6UZH7 168 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 NPIPA3F8WFD2 350 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PLPP3O14495 311 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 DUX1O43812 170 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 NME2P1O60361 137 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 NPIPB7O75200 414 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 NTN1O95631 604 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 TOMM40O96008 361 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 IL2RAP01589 272 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 HLA-AP01891 365 aaKnown RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 CD3DP04234 171 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 IGKV3-11P04433 115 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 OR10J4P0C629 311 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PF4V1P10720 104 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PVRP15151 417 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ADRA2CP18825 462 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 CSRP1P21291 193 aaKnown RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 CD27P26842 260 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 IL2RGP31785 369 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 DLSTP36957 453 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 AKR1C3P42330 323 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 LSSP48449 732 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 COMPP49747 757 aaPredicted RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PPOXP50336 477 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 NOVA1P51513 510 aaKnown RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 CAV2P51636 162 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms