RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 FAM189A2Q15884 450 aa14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 CEP78Q5JTW2 689 aa14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 LCN8Q6JVE9 175 aa14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 PLBD1Q6P4A8 553 aa14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 KRT74Q7RTS7 529 aa14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 FAM81AQ8TBF8 368 aa14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 YY1AP1Q9H869 796 aa14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 VSIG10L2P0DP72 767 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 CAPZA1P52907 286 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 CEACAM21Q3KPI0 293 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 DMRTC1Q5HYR2 192 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 LIAT1Q6ZQX7 453 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 THAP5Q7Z6K1 395 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 OR5K1Q8NHB7 308 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 FEVQ99581 238 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 NPFFR1Q9GZQ6 430 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 NIPAL2Q9H841 368 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 ZNF281Q9Y2X9 895 aa14.85□□□□□ -0.03
VIPAS39-209ENST00000556909 PRR23D1E9PI22 279 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 PIN1P1O15428 100 aa14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 MTRF1O75570 445 aaKnown RBP14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 PRR23D2P0DMB1 279 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 MAP2K3P46734 347 aa14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 BMXP51813 675 aa14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 HAGHLQ6PII5 290 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 REC114Q7Z4M0 266 aa14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 ZNF671Q8TAW3 534 aa14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 PIFOQ8TCI5 191 aa14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 AQP3Q92482 292 aa14.84□□□□□ -0.03
VIPAS39-209ENST00000556909 A0A0U1RQV5 110 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 OR5B21A6NL26 309 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 PRODHO43272 600 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 RPL31P62899 125 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 SMIM21Q3B7S5 101 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 FAM98BQ52LJ0 330 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 ACP7Q6ZNF0 438 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 TRPM8Q7Z2W7 1104 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 DHFR2Q86XF0 187 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 LYG1Q8N1E2 194 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 C11orf42Q8N5U0 333 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 CD177Q8N6Q3 437 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 OR5A2Q8NGI9 324 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 GIPC3Q8TF64 312 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 MUC13Q9H3R2 512 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 HEXA-AS1Q9H8Q6 139 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 ZNF702PQ9H963 129 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 FAM206AQ9NX38 181 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 RASL12Q9NYN1 266 aa14.83□□□□□ -0.04
VIPAS39-209ENST00000556909 ARRDC5A6NEK1 342 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 RFPL4AA6NLU0 287 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 RFPL4AL1F8VTS6 287 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 ALOX5APP20292 161 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 COX7A1P24310 79 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 GK3PQ14409 553 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 GINS1Q14691 196 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 PLCXD3Q63HM9 321 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 TMEM200BQ69YZ2 307 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 KRT77Q7Z794 578 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 COMMD2Q86X83 199 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 POC1AQ8NBT0 407 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 BBS1Q8NFJ9 593 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 ZNF488Q96MN9 340 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 NKX3-1Q99801 234 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 USE1Q9NZ43 259 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 LAMP5Q9UJQ1 280 aa14.82□□□□□ -0.04
VIPAS39-209ENST00000556909 A0A1W2PPH5 198 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 FBXO24O75426 580 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 ALX3O95076 343 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 IGLV3-1P01715 115 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 CCL3L1P16619 93 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 FAHP16930 419 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 SLC2A5P22732 501 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 CEBPDP49716 269 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 HCCSP53701 268 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 ERVFRD-1P60508 538 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 RIPPLY1Q0D2K3 151 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 HABP2Q14520 560 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 ZNF273Q14593 569 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 NSUN5P1Q3KNT7 163 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 OXLD1Q5BKU9 147 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 SLC35D3Q5M8T2 416 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 MOB3CQ70IA8 216 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 LHFPL4Q7Z7J7 247 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 CPOQ8IVL8 374 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 ZNF561Q8N587 486 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 DTX3Q8N9I9 347 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 PPP1R14AQ96A00 147 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 GPR84Q9NQS5 396 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 SERTAD4Q9NUC0 356 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 ARL2BPQ9Y2Y0 163 aa14.81□□□□□ -0.04
VIPAS39-209ENST00000556909 TMEM269A0A1B0GVZ9 245 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 ACOD1A6NK06 481 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 VGLL3A8MV65 326 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 PSMD9O00233 223 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 SLC1A7O00341 560 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 SYNGR1O43759 233 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 PGA5P0DJD9 388 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 CD28P10747 220 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 ATP6V1B1P15313 513 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 LGALS4P56470 323 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms