RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PPP1R14AQ96A00 147 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 NRBF2Q96F24 287 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 DUS3LQ96G46 650 aaKnown RBP18.52■□□□□ 0.56
ACTN1-220ENST00000556433 OR8B4Q96RC9 309 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 GPR84Q9NQS5 396 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 ZNRD1Q9P1U0 126 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 COPS3Q9UNS2 423 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 POMPQ9Y244 141 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 TMEM14AQ9Y6G1 99 aa18.52■□□□□ 0.56
ACTN1-220ENST00000556433 IGKV1D-17A0A075B6S4 117 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 PRR32B1ATL7 298 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 M0R1W7 72 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 PAHP00439 452 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 PSG2P11465 335 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 ROM1Q03395 351 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 BLMHQ13867 455 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 Q6ZSV7 163 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 ZNRF1Q8ND25 227 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 ASB17Q8WXJ9 295 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 TTTY10Q9BZA0 68 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 METTL8Q9H825 291 aaKnown RBP18.51■□□□□ 0.55
ACTN1-220ENST00000556433 ELL3Q9HB65 397 aaPredicted RBP18.51■□□□□ 0.55
ACTN1-220ENST00000556433 IKZF2Q9UKS7 526 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 PIGLQ9Y2B2 252 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 MAB21L2Q9Y586 359 aa18.51■□□□□ 0.55
ACTN1-220ENST00000556433 MEIOCA2RUB1 952 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 OR5B21A6NL26 309 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 M0QZ24 198 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 TIMM23O14925 209 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 CLPXO76031 633 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 DAPP51397 102 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 UBE2E1P51965 193 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 RIDAP52758 137 aaKnown RBP18.5■□□□□ 0.55
ACTN1-220ENST00000556433 PROK1P58294 105 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 PTGES3Q15185 160 aaKnown RBP18.5■□□□□ 0.55
ACTN1-220ENST00000556433 OCLNQ16625 522 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 ZNF829Q3KNS6 432 aaPredicted RBP18.5■□□□□ 0.55
ACTN1-220ENST00000556433 PLCXD3Q63HM9 321 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 NCR3LG1Q68D85 454 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 DHRS7BQ6IAN0 325 aaPredicted RBP18.5■□□□□ 0.55
ACTN1-220ENST00000556433 HAGHLQ6PII5 290 aaPredicted RBP18.5■□□□□ 0.55
ACTN1-220ENST00000556433 TMEM185AQ8NFB2 350 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 AQP3Q92482 292 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 ENPP5Q9UJA9 477 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 ZNF222Q9UK12 451 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 VPREB3Q9UKI3 123 aa18.5■□□□□ 0.55
ACTN1-220ENST00000556433 WNK1Q9H4A3 2382 aa18.49■□□□□ 0.55
ACTN1-220ENST00000556433 PRKYO43930 277 aa18.49■□□□□ 0.55
ACTN1-220ENST00000556433 IGLV3-1P01715 115 aa18.49■□□□□ 0.55
ACTN1-220ENST00000556433 FAHP16930 419 aa18.49■□□□□ 0.55
ACTN1-220ENST00000556433 SAA4P35542 130 aa18.49■□□□□ 0.55
ACTN1-220ENST00000556433 ZBTB37Q5TC79 503 aa18.49■□□□□ 0.55
ACTN1-220ENST00000556433 FAHD1Q6P587 224 aa18.49■□□□□ 0.55
ACTN1-220ENST00000556433 SLC7A6OSQ96CW6 309 aaPredicted RBP18.49■□□□□ 0.55
ACTN1-220ENST00000556433 CNN2Q99439 309 aaKnown RBP18.49■□□□□ 0.55
ACTN1-220ENST00000556433 RASL12Q9NYN1 266 aa18.49■□□□□ 0.55
ACTN1-220ENST00000556433 NUFIP1Q9UHK0 495 aaKnown RBP18.49■□□□□ 0.55
ACTN1-220ENST00000556433 H0YAE9 185 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 DNAJC8O75937 253 aaPredicted RBP18.48■□□□□ 0.55
ACTN1-220ENST00000556433 NRASP01111 189 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 CAPZA1P52907 286 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 MFGE8Q08431 387 aaPredicted RBP18.48■□□□□ 0.55
ACTN1-220ENST00000556433 ACSM1Q08AH1 577 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 MIDNQ504T8 468 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 ZNF684Q5T5D7 378 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 ASPHD2Q6ICH7 369 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 MEPCEQ7L2J0 689 aaKnown RBP18.48■□□□□ 0.55
ACTN1-220ENST00000556433 BCDIN3DQ7Z5W3 292 aaKnown RBP18.48■□□□□ 0.55
ACTN1-220ENST00000556433 FAM185AQ8N0U4 392 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 SDSLQ96GA7 329 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 C16orf95Q9H693 158 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 H2AFY2Q9P0M6 372 aaPredicted RBP18.48■□□□□ 0.55
ACTN1-220ENST00000556433 GTF2A1LQ9UNN4 478 aa18.48■□□□□ 0.55
ACTN1-220ENST00000556433 SF3B6Q9Y3B4 125 aaKnown RBP18.48■□□□□ 0.55
ACTN1-220ENST00000556433 TRBV23-1A0A0A0MS06 115 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 MTRF1O75570 445 aaKnown RBP18.47■□□□□ 0.55
ACTN1-220ENST00000556433 DHRS3O75911 302 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 TTRP02766 147 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 TGFBR2P37173 567 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 ESRRGP62508 458 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 PDLIM3Q53GG5 364 aaPredicted RBP18.47■□□□□ 0.55
ACTN1-220ENST00000556433 ZNF322Q6U7Q0 402 aaPredicted RBP18.47■□□□□ 0.55
ACTN1-220ENST00000556433 OR5D13Q8NGL4 314 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 OR5R1Q8NH85 324 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 OR5K1Q8NHB7 308 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 UTP4Q969X6 686 aaKnown RBP18.47■□□□□ 0.55
ACTN1-220ENST00000556433 ZNF488Q96MN9 340 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 APOL4Q9BPW4 351 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 RBM4BQ9BQ04 359 aaKnown RBP18.47■□□□□ 0.55
ACTN1-220ENST00000556433 PRRG3Q9BZD7 231 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 TCF7L1Q9HCS4 588 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 CMYA5Q8N3K9 4069 aa18.47■□□□□ 0.55
ACTN1-220ENST00000556433 RFPL4AA6NLU0 287 aa18.46■□□□□ 0.55
ACTN1-220ENST00000556433 RFPL4AL1F8VTS6 287 aa18.46■□□□□ 0.55
ACTN1-220ENST00000556433 MAGEB4O15481 346 aaPredicted RBP18.46■□□□□ 0.55
ACTN1-220ENST00000556433 CXCR4P61073 352 aa18.46■□□□□ 0.55
ACTN1-220ENST00000556433 ACTR3P61158 418 aa18.46■□□□□ 0.55
ACTN1-220ENST00000556433 ACP7Q6ZNF0 438 aa18.46■□□□□ 0.55
ACTN1-220ENST00000556433 SLC35F2Q8IXU6 374 aa18.46■□□□□ 0.55
ACTN1-220ENST00000556433 TCEANCQ8N8B7 351 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms