RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ENSAO43768 121 aaKnown RBP9.59□□□□□ -0.87
SLIRP-205ENST00000556310 PPIAL4GP0DN37 164 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 PEX2P28328 305 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 KIR3DL2P43630 455 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 GABPB1Q06547 395 aaPredicted RBP9.59□□□□□ -0.87
SLIRP-205ENST00000556310 PAX8Q06710 450 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 ARMCX4Q5H9R4 360 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 STUMQ69YW2 141 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 MOB3CQ70IA8 216 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 PRSS35Q8N3Z0 413 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 APH1BQ8WW43 257 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 MRPL48Q96GC5 212 aaKnown RBP9.59□□□□□ -0.87
SLIRP-205ENST00000556310 MYCBPQ99417 103 aaPredicted RBP9.59□□□□□ -0.87
SLIRP-205ENST00000556310 NUDT16L1Q9BRJ7 211 aaKnown RBP9.59□□□□□ -0.87
SLIRP-205ENST00000556310 OR51I2Q9H344 312 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 PLEKHA1Q9HB21 404 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 SMURF1Q9HCE7 757 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 A0A0A6YYJ9 748 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 KIR2DS1A0A191URI9 304 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 LOC107986453A0A1B0GWG9 222 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 C22orf46C9J442 243 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 TMPRSS2O15393 492 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 SYT7O43581 403 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 FADS2O95864 444 aaKnown RBP9.58□□□□□ -0.88
SLIRP-205ENST00000556310 IGHA1P01876 353 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 OR12D2P58182 307 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 RAB40BQ12829 278 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 LRRC36Q1X8D7 754 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 ODF4Q2M2E3 257 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
SLIRP-205ENST00000556310 CD276Q5ZPR3 534 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 LPCAT4Q643R3 524 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 FDX2Q6P4F2 183 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 SLC36A1Q7Z2H8 476 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 OR2G2Q8NGZ5 317 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
SLIRP-205ENST00000556310 AQP3Q92482 292 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 C10orf35Q96D05 121 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 ADI1Q9BV57 179 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 ALG8Q9BVK2 526 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 DNTTIP1Q9H147 329 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 WDR13Q9H1Z4 485 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 INPP5EQ9NRR6 644 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 GPR173Q9NS66 373 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 MRPS18AQ9NVS2 196 aaKnown RBP9.58□□□□□ -0.88
SLIRP-205ENST00000556310 DNAJB11Q9UBS4 358 aa9.58□□□□□ -0.88
SLIRP-205ENST00000556310 RPL36Q9Y3U8 105 aaKnown RBP9.58□□□□□ -0.88
SLIRP-205ENST00000556310 PQLC2LA1A4F0 135 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 ANKRD61A6NGH8 418 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 NKX6-3A6NJ46 265 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 ANKRD65E5RJM6 399 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 J3QT63 122 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 DVL1O14640 695 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 CASQ2O14958 399 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-205ENST00000556310 AKR7A2O43488 359 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 WBP4O75554 376 aaKnown RBP9.57□□□□□ -0.88
SLIRP-205ENST00000556310 RHBDL1O75783 438 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 GATBO75879 557 aaKnown RBP9.57□□□□□ -0.88
SLIRP-205ENST00000556310 HTR1AP08908 422 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 CCR9P51686 369 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 GALEQ14376 348 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 KRTAP24-1Q3LI83 254 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 DMRTC1Q5HYR2 192 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 KLF17Q5JT82 389 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-205ENST00000556310 ATPAF1Q5TC12 328 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-205ENST00000556310 OGFRL1Q5TC84 451 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF691Q5VV52 312 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 TMEM244Q5VVB8 128 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 TTC23Q5W5X9 447 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 HAGHLQ6PII5 290 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-205ENST00000556310 USP43Q70EL4 1123 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF573Q86YE8 665 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 EGFL6Q8IUX8 553 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 SYS1Q8N2H4 156 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 SETD9Q8NE22 299 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF671Q8TAW3 534 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 CYGBQ8WWM9 190 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 UPRTQ96BW1 309 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 SEH1LQ96EE3 360 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 PELI1Q96FA3 418 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 C4orf36Q96KX1 117 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 CCL13Q99616 98 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 CHST5Q9GZS9 411 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 AMBNQ9NP70 447 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 NLKQ9UBE8 527 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 NUP50Q9UKX7 468 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 MYRFQ9Y2G1 1151 aa9.57□□□□□ -0.88
SLIRP-205ENST00000556310 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
SLIRP-205ENST00000556310 A0A1B0GW55 424 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 A6NIN4 97 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 H3BSH0 61 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 J3QLW9 94 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 FCN3O75636 299 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 CLIC3O95833 236 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ECDO95905 644 aaPredicted RBP9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ISG15P05161 165 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 LIPFP07098 398 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 DUX4L2P0CJ85 424 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 DUX4L3P0CJ86 424 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 DUX4L4P0CJ87 422 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms