RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 OOEPA6NGQ2 149 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 ZNF879B4DU55 563 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 H3BN98 237 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 CLDN34H7C241 214 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 XRCC2O43543 280 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 E2F6O75461 281 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 TOX4O94842 621 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 CRYBA1P05813 215 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 BTF3P20290 206 aaKnown RBP5.55□□□□□ -1.52
PSEN1-216ENST00000556066 MDKP21741 143 aaPredicted RBP5.55□□□□□ -1.52
PSEN1-216ENST00000556066 POU1F1P28069 291 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 POLR2IP36954 125 aaKnown RBP5.55□□□□□ -1.52
PSEN1-216ENST00000556066 CFHR2P36980 270 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 ALDH3B2P48448 385 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 NPY4RP50391 375 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 DAPP51397 102 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 SLC25A1P53007 311 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 GMFBP60983 142 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 GRB2P62993 217 aaKnown RBP5.55□□□□□ -1.52
PSEN1-216ENST00000556066 IL13RA1P78552 427 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 MZT1Q08AG7 82 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 MICAQ29983 383 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 FAM209BQ5JX69 171 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 METTL11BQ5VVY1 283 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 C9orf139Q6ZV77 190 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 FAM57BQ71RH2 274 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 SLC16A9Q7RTY1 509 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 DPY19L4Q7Z388 723 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 PDZD9Q8IXQ8 264 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 PNLDC1Q8NA58 520 aaKnown RBP5.55□□□□□ -1.52
PSEN1-216ENST00000556066 CLRN3Q8NCR9 226 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 ZNF555Q8NEP9 628 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 OR10G2Q8NGC3 310 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 TEX47Q8TBZ9 253 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 LRRC29Q8WV35 223 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 ST8SIA4Q92187 359 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 REEP6Q96HR9 211 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 INTS14Q96SY0 518 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 TSC22D3Q99576 134 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 RBM4BQ9BQ04 359 aaKnown RBP5.55□□□□□ -1.52
PSEN1-216ENST00000556066 ABHD6Q9BV23 337 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 PAPOLGQ9BWT3 736 aaKnown RBP5.55□□□□□ -1.52
PSEN1-216ENST00000556066 NMNAT2Q9BZQ4 307 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 OR51V1Q9H2C8 321 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 OPA3Q9H6K4 179 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 SMURF1Q9HCE7 757 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 TRIM36Q9NQ86 728 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 CEPT1Q9Y6K0 416 aa5.55□□□□□ -1.52
PSEN1-216ENST00000556066 A0A087WXM4 84 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 CENPVL3A0A0U1RRI6 287 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 LOC100130705A0A1B0GUX0 176 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 SMIM31A0A1B0GVY4 71 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 SRRM5B3KS81 715 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 P2RY10O00398 339 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 DVL1O14640 695 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 NDUFA2O43678 99 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 PTBP3O95758 552 aaKnown RBP5.54□□□□□ -1.52
PSEN1-216ENST00000556066 APOC1P02654 83 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 LIPFP07098 398 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 H2BFMP0C1H6 154 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 PAICSP22234 425 aaKnown RBP5.54□□□□□ -1.52
PSEN1-216ENST00000556066 GRK5P34947 590 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 DDOSTP39656 456 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 BLVRAP53004 296 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 ZNF121P58317 390 aaPredicted RBP5.54□□□□□ -1.52
PSEN1-216ENST00000556066 ARF6P62330 175 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 CSNK2BP67870 215 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 FAM3AP98173 230 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 PCK2Q16822 640 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 MICBQ29980 383 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 KCTD21Q4G0X4 260 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 KLHL12Q53G59 568 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 TEX30Q5JUR7 227 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 TTC23Q5W5X9 447 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 LAIR2Q6ISS4 152 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 C11orf88Q6PI97 169 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 FIP1L1Q6UN15 594 aaKnown RBP5.54□□□□□ -1.52
PSEN1-216ENST00000556066 THAP5Q7Z6K1 395 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 WDR86Q86TI4 376 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 FAM90A1Q86YD7 464 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.54□□□□□ -1.52
PSEN1-216ENST00000556066 OR8H3Q8N146 312 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 GCSAMQ8N6F7 178 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 SCCPDHQ8NBX0 429 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 GIPC3Q8TF64 312 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 THEM6Q8WUY1 208 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 LHX4Q969G2 390 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 SGK3Q96BR1 496 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 DGCR14Q96DF8 476 aaKnown RBP5.54□□□□□ -1.52
PSEN1-216ENST00000556066 PGAM5Q96HS1 289 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 WDFY2Q96P53 400 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 TBX15Q96SF7 602 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 AMELYQ99218 206 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 FEVQ99581 238 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 CCL13Q99616 98 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 NIPSNAP1Q9BPW8 284 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 DGCR6LQ9BY27 220 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 CHIAQ9BZP6 476 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 GABARAPL1Q9H0R8 117 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 RBM38Q9H0Z9 239 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms