RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TNFAIP8L1Q8WVP5 186 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 FAM46BQ96A09 425 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 TAAR3PQ9P1P4 343 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 ING4Q9UNL4 249 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 MRPS28Q9Y2Q9 187 aaKnown RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 FLNCQ14315 2725 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 MYO18BQ8IUG5 2567 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 USP9XQ93008 2570 aaPredicted RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 SPTAN1Q13813 2472 aaKnown RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 IGLV3-9A0A075B6K5 115 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 TMEM272A0A1B0GTI8 110 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 A0A1W2PP11 408 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 PQLC2LA1A4F0 135 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 FAM25AB3EWG3 89 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 FAM25CB3EWG5 89 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 FAM25GB3EWG6 89 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 TMEM225BP0DP42 221 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 CALCBP10092 127 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 CFPP27918 469 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 LOXP28300 417 aaPredicted RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 RBMXP38159 391 aaKnown RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 HAAOP46952 286 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 ATP1B3P54709 279 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 ZP1P60852 638 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 OR8G1Q15617 311 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 LHFPL2Q6ZUX7 228 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 BIVMQ86UB2 503 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 OR5A2Q8NGI9 324 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 OR10K1Q8NGX5 313 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 LILRB1Q8NHL6 650 aaPredicted RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 MRPL24Q96A35 216 aaKnown RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 DIRAS2Q96HU8 199 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 ADAT1Q9BUB4 502 aaKnown RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 RNF115Q9Y4L5 304 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 LOC100289279A0A1B0GTE1 492 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 F5H5P2 479 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 J3QKU1 62 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 INHBBP09529 407 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 VSIG8P0DPA2 414 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 ALDH3B1P43353 468 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 CNIH2Q6PI25 160 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 WDR86Q86TI4 376 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 CDH26Q8IXH8 852 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 CMTM4Q8IZR5 234 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 PNLDC1Q8NA58 520 aaKnown RBP8.69□□□□□ -1.02
SRP54-208ENST00000555557 SLC25A38Q96DW6 304 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 C1orf147Q96MC9 270 aaPredicted RBP8.69□□□□□ -1.02
SRP54-208ENST00000555557 TECTBQ96PL2 329 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 ELL3Q9HB65 397 aaPredicted RBP8.69□□□□□ -1.02
SRP54-208ENST00000555557 NEK6Q9HC98 313 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 AKIP1Q9NQ31 210 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 ABCA4P78363 2273 aa8.69□□□□□ -1.02
SRP54-208ENST00000555557 IGKV1-12A0A0C4DH73 117 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 ZSCAN5BA6NJL1 495 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 J3QRK9 145 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 SPRY3O43610 288 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 IGKV1D-12P01611 117 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 NAT2P11245 290 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 IGFBP2P18065 325 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 EVX1P49640 407 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 SELENOVP59797 346 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 GNG3P63215 75 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 QRFPP83859 136 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 PDZK1IP1Q13113 114 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 MAB21L1Q13394 359 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 UNC119Q13432 240 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 RIN1Q13671 783 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 NKPD1Q17RQ9 610 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 SLC22A6Q4U2R8 563 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 SLC25A26Q70HW3 274 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 IZUMO1Q8IYV9 350 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 ZCCHC24Q8N2G6 241 aaKnown RBP8.68□□□□□ -1.02
SRP54-208ENST00000555557 MFSD4AQ8N468 514 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 ZNF611Q8N823 705 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 MINDY2Q8NBR6 621 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 TMEM104Q8NE00 496 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 OR2Z1Q8NG97 314 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 OR13G1Q8NGZ3 307 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 MICU1Q9BPX6 476 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 PLK3Q9H4B4 646 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 BANF2Q9H503 90 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 ZNF442Q9H7R0 627 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 CISD1Q9NZ45 108 aaKnown RBP8.68□□□□□ -1.02
SRP54-208ENST00000555557 EXTL2Q9UBQ6 330 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 PLSCR5A0PG75 271 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 LDLRAD4O15165 306 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 GRPP07492 148 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 SERPINA2P20848 420 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 SERPINF1P36955 418 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 ART1P52961 327 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 SPRNQ5BIV9 151 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 UBE2NLQ5JXB2 153 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 HAGHLQ6PII5 290 aaPredicted RBP8.68□□□□□ -1.02
SRP54-208ENST00000555557 LRRC28Q86X40 367 aaPredicted RBP8.68□□□□□ -1.02
SRP54-208ENST00000555557 OR4M1Q8NGD0 313 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 OR51F2Q8NH61 342 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 WDFY2Q96P53 400 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 S100A13Q99584 98 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms