RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 FSTL3O95633 263 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 CPSF4O95639 269 aaKnown RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 PTHP01270 115 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 CATP04040 527 aaKnown RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 GOLGA8HP0CJ92 632 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZNF708P17019 499 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 GPR1P46091 355 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 OR12D2P58182 307 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 MTPNP58546 118 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 C2orf54Q08AI8 447 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 MAPRE2Q15555 327 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZNF181Q2M3W8 571 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 HSDL1Q3SXM5 330 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 RWDD4Q6NW29 188 aaKnown RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 TMEM53Q6P2H8 277 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 TMEM220Q6QAJ8 160 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZYG11AQ6WRX3 759 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 FA2HQ7L5A8 372 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 CTAGE6Q86UF2 777 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZCCHC24Q8N2G6 241 aaKnown RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 TRAM1L1Q8N609 369 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZDHHC22Q8N966 263 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZFP62Q8NB50 900 aaPredicted RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 SLC26A10Q8NG04 563 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 OR52N1Q8NH53 320 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 OR1S1Q8NH92 325 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 OR5P3Q8WZ94 311 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 C8orf44Q96CB5 159 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 RCN3Q96D15 328 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 SNF8Q96H20 258 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 SLC25A44Q96H78 314 aaPredicted RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZBED3Q96IU2 234 aaPredicted RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 RDH12Q96NR8 316 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 PLIN2Q99541 437 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 CHP1Q99653 195 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 GPR21Q99679 349 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 CCDC77Q9BR77 488 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZC4H2Q9NQZ6 224 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 HEBP1Q9NRV9 189 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 C20orf96Q9NUD7 363 aaPredicted RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 TMEM38BQ9NVV0 291 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 EXTL2Q9UBQ6 330 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZNF706Q9Y5V0 76 aaPredicted RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.32
SRP54-207ENST00000555535 KMT2EQ8IZD2 1858 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 INSRP06213 1382 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 STRCP1A6NGW2 1772 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 IGKV1OR2-108A0A075B7D4 117 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 KBTBD11-OT1A0A1B0GTJ5 212 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 A6NDN8 102 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 GGTLC3B5MD39 225 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 H3BQ85 93 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 FFAR1O14842 300 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 PSPHP1O15172 72 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 SIVA1O15304 175 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 CTNSO60931 367 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 PSIP1O75475 530 aaKnown RBP0.58□□□□□ -2.32
SRP54-207ENST00000555535 OR2F2O95006 317 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 FARS2O95363 451 aaKnown RBP0.58□□□□□ -2.32
SRP54-207ENST00000555535 HLA-HP01893 362 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 P0DMU3 169 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 FAM231AP0DMU4 169 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 FAM231CP0DMU5 169 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 GZMHP20718 246 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 CSRP1P21291 193 aaKnown RBP0.58□□□□□ -2.32
SRP54-207ENST00000555535 CD9P21926 228 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 CRABP2P29373 138 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 ATP6V0D1P61421 351 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 IRF8Q02556 426 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 ZNF33AQ06730 810 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 ITIH4Q14624 930 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 TSC22D1Q15714 1073 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 HADHQ16836 314 aaKnown RBP0.58□□□□□ -2.32
SRP54-207ENST00000555535 TMEM241Q24JQ0 296 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 SPANXN2Q5MJ10 180 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 MLIPQ5VWP3 458 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 STEAP4Q687X5 459 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 ZNF773Q6PK81 442 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 WDR82Q6UXN9 313 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 TMPPEQ6ZT21 453 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 TRMT10CQ7L0Y3 403 aaKnown RBP0.58□□□□□ -2.32
SRP54-207ENST00000555535 SSX9Q7RTT3 188 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 OFCC1Q8IZS5 231 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 WDR31Q8NA23 367 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 OR2K2Q8NGT1 345 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 FAM57AQ8TBR7 257 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 SFXN5Q8TD22 340 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 LMX1AQ8TE12 382 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 MCUR1Q96AQ8 359 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 PPP1R36Q96LQ0 422 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 C11orf70Q9BRQ4 267 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 MRPL20Q9BYC9 149 aaKnown RBP0.58□□□□□ -2.32
SRP54-207ENST00000555535 ARV1Q9H2C2 271 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 PLEKHF2Q9H8W4 249 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 REEP1Q9H902 201 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 AHSPQ9NZD4 102 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 ZMAT5Q9UDW3 170 aaKnown RBP0.58□□□□□ -2.32
SRP54-207ENST00000555535 ZBED9Q6R2W3 1325 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 ICE1Q9Y2F5 2266 aa0.58□□□□□ -2.32
SRP54-207ENST00000555535 SHANK3Q9BYB0 1731 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms