RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 LMO7DNF2Z398 122 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 EPPINO95925 133 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 PGA3P0DJD8 388 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 KHDC1LQ5JSQ8 128 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 LHX8Q68G74 356 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 C19orf35Q6ZS72 473 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 OIT3Q8WWZ8 545 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 LRRC61Q9BV99 259 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 NARFLQ9H6Q4 476 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 MPC2O95563 127 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 TTRP02766 147 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 CCKARP32238 428 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 CD300CQ08708 224 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 ZNF141Q15928 474 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 FA2HQ7L5A8 372 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 HSD17B13Q7Z5P4 300 aaPredicted RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 MBTPS2O43462 519 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 DUS4LO95620 317 aaKnown RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 SEMG1P04279 462 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 RPL29P47914 159 aaKnown RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 CNN1P51911 297 aaKnown RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 PPIAP62937 165 aaKnown RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 MYBPHQ13203 477 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 ETFDHQ16134 617 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 DMRTC1Q5HYR2 192 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 DHRS7BQ6IAN0 325 aaPredicted RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 ARHGAP5-AS1Q96IT6 56 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 FOXB1Q99853 325 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 DEFB127Q9H1M4 99 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 ASCC3Q8N3C0 2202 aaKnown RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 OR2W5A6NFC9 320 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 SNCGO76070 127 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 YBX1P67809 324 aaKnown RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 KISS1Q15726 138 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 SLC25A30Q5SVS4 291 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 THSD4Q6ZMP0 1018 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 FBXL14Q8N1E6 418 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 OR2A5Q96R48 311 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 CTSVO60911 334 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 AMTP48728 403 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 CEACAM16Q2WEN9 425 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 MRM1Q6IN84 353 aaKnown RBP12.48□□□□□ -0.41
VTI1B-204ENST00000554659 GALMQ96C23 342 aa12.48□□□□□ -0.41
VTI1B-204ENST00000554659 CDC42EP2O14613 210 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 GPR37O15354 613 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 SRFP11831 508 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 NOVA1P51513 510 aaKnown RBP12.47□□□□□ -0.41
VTI1B-204ENST00000554659 COTL1Q14019 142 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 FAHD2BQ6P2I3 314 aaPredicted RBP12.47□□□□□ -0.41
VTI1B-204ENST00000554659 PRSS54Q6PEW0 395 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 OR2M7Q8NG81 312 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 PIK3IP1Q96FE7 263 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 FAHD2AQ96GK7 314 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 KIAA1456Q9P272 454 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 KNL1Q8NG31 2342 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 MASP2O00187 686 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 CIDEAO60543 219 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 CDKN2AP42771 156 aaKnown RBP12.47□□□□□ -0.41
VTI1B-204ENST00000554659 ZIC1Q15915 447 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 ADPRHL1Q8NDY3 354 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.47□□□□□ -0.41
VTI1B-204ENST00000554659 SARAFQ96BY9 339 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 DCAF16Q9NXF7 216 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 UBE2L5PA0A1B0GUS4 154 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 NPIPB8E9PQR5 432 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 COX7A2P2O60397 106 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 DHRS3O75911 302 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 HIST1H3AP68431 136 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 PROCRQ9UNN8 238 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 IGHA1P01876 353 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 FBP1P09467 338 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 PTGFRP43088 359 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 TIAL1Q01085 375 aaKnown RBP eCLIP12.47□□□□□ -0.41
VTI1B-204ENST00000554659 SMIM21Q3B7S5 101 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 ADGRG7Q96K78 797 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 CCL27Q9Y4X3 112 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 USP54Q70EL1 1684 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 LINC01387J3KSC0 135 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 CRYAAP02489 173 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 CISD3P0C7P0 127 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 FMODQ06828 376 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 GGNBP1Q5YKI7 109 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 NHLRC1Q6VVB1 395 aa12.47□□□□□ -0.41
VTI1B-204ENST00000554659 ZNF275Q9NSD4 429 aaPredicted RBP12.47□□□□□ -0.41
VTI1B-204ENST00000554659 LYRM2Q9NU23 88 aaPredicted RBP12.47□□□□□ -0.41
VTI1B-204ENST00000554659 ALG1L2C9J202 215 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 OGG1O15527 345 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 CYC1P08574 325 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 FAM157BP0CG42 384 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 IRF3Q14653 427 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 TCTN1Q2MV58 587 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 VWA1Q6PCB0 445 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 FAM24BQ8N5W8 94 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 ROBO4Q8WZ75 1007 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 FGF14Q92915 247 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 ALKBH3Q96Q83 286 aaPredicted RBP12.46□□□□□ -0.41
VTI1B-204ENST00000554659 EDEM2Q9BV94 578 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms