RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 AGAP6Q5VW22 663 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 MED27Q6P2C8 311 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 KIRREL2Q6UWL6 708 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 UGT2A3Q6UWM9 527 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 FAM131AQ6UXB0 335 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 UNQ9370/PRO34162Q6UXP9 181 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 OLIG3Q7RTU3 272 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 TMPRSS11BQ86T26 416 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SPPL2CQ8IUH8 684 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SLC22A15Q8IZD6 547 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF283Q8N7M2 679 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 RELL2Q8NC24 303 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 OR1K1Q8NGR3 316 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 OR5B3Q8NH48 314 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SLC35B2Q8TB61 432 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 MZB1Q8WU39 189 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 PSMF1Q92530 271 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 NEIL2Q969S2 332 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 RPEQ96AT9 228 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 LGALS12Q96DT0 336 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 GPR137Q96N19 417 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 FOXC2Q99958 501 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 THAP7Q9BT49 309 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SRMSQ9H3Y6 488 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SSU72Q9NP77 194 aaKnown RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 CLN6Q9NWW5 311 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SLC25A37Q9NYZ2 338 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 CISD1Q9NZ45 108 aaKnown RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 NPAP1Q9NZP6 1156 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 B3GAT1Q9P2W7 334 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 IKZF2Q9UKS7 526 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 HHLA2Q9UM44 414 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SAMD4AQ9UPU9 718 aaKnown RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ANGPT4Q9Y264 503 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SLC35A3Q9Y2D2 325 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 AMDHD2Q9Y303 409 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 TIMM10BQ9Y5J6 103 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ACTL7BQ9Y614 415 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 POLEQ07864 2286 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 NUP214P35658 2090 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 IGHV1-45A0A0A0MS14 117 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 A0A1W2PR48 441 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 CDHR4A6H8M9 788 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 FTCDNL1E5RQL4 147 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 E7ENX8 843 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SOCS2O14508 198 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 TP53I11O14683 189 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 CDIPTO14735 213 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 FGF16O43320 207 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 GNG7O60262 68 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 CLDN9O95484 217 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 GPR75O95800 540 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ADH4P08319 380 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 CSF3P09919 207 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 COX6A1P12074 109 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 PRKACGP22612 351 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 RPS3P23396 243 aaKnown RBP eCLIP2.35□□□□□ -2.034e-8■■■■□ 19.6
PRPF39-206ENST00000554429 TACR1P25103 407 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 HTR5AP47898 357 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 LGALS7P47929 136 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 OR10A3P58181 314 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 RSU1Q15404 277 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 RABL3Q5HYI8 236 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF774Q6NX45 483 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SLC27A4Q6P1M0 643 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF474Q6S9Z5 364 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 C12orf54Q6X4T0 127 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 Q6ZSR3 168 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 C8orf86Q6ZUL3 223 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 CROCCP2Q86T23 111 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ADGRG3Q86Y34 549 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 LDLRAD3Q86YD5 345 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 C1QL4Q86Z23 238 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 RNF113BQ8IZP6 322 aaKnown RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 MUC15Q8N387 334 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 CBR4Q8N4T8 237 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 AMER2Q8N7J2 671 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ARIH2OSQ8N7S6 290 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 OR11G2Q8NGC1 345 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 OR4L1Q8NH43 312 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SPATA22Q8NHS9 363 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SLC38A5Q8WUX1 472 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 LCN9Q8WX39 176 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 TOMM40LQ969M1 308 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 IMMP1LQ96LU5 166 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 Q96M66 194 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 IL17FQ96PD4 163 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ABHD14AQ9BUJ0 271 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 MRPL18Q9H0U6 180 aaKnown RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 METTL17Q9H7H0 456 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 NMNAT1Q9HAN9 279 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 FAM60AQ9NP50 221 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 GPR173Q9NS66 373 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ASB6Q9NWX5 421 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 GLS2Q9UI32 602 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 SSR3Q9UNL2 185 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 ING4Q9UNL4 249 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 POLDIP2Q9Y2S7 368 aa2.35□□□□□ -2.03
PRPF39-206ENST00000554429 YARS2Q9Y2Z4 477 aaKnown RBP2.35□□□□□ -2.03
PRPF39-206ENST00000554429 RNF11Q9Y3C5 154 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms